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ECOLI:YPDA
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | ypdA | |
| Protein Name(s) | Sensor histidine kinase YpdA | |
| External Links | ||
| UniProt | P0AA93 | |
| EMBL | U00096 AP009048 | |
| PIR | A65012 | |
| RefSeq | NP_416881.1 YP_490622.1 | |
| ProteinModelPortal | P0AA93 | |
| SMR | P0AA93 | |
| STRING | 511145.b2380 | |
| PaxDb | P0AA93 | |
| PRIDE | P0AA93 | |
| EnsemblBacteria | AAC75439 BAA16250 | |
| GeneID | 12931551 946723 | |
| KEGG | ecj:Y75_p2347 eco:b2380 | |
| PATRIC | 32120139 | |
| EchoBASE | EB3900 | |
| EcoGene | EG14148 | |
| eggNOG | COG3275 | |
| HOGENOM | HOG000242218 | |
| InParanoid | P0AA93 | |
| KO | K02478 | |
| OMA | RYLRYNL | |
| OrthoDB | EOG6RVFWR | |
| PhylomeDB | P0AA93 | |
| BioCyc | EcoCyc:G7243-MONOMER ECOL316407:JW5388-MONOMER | |
| PRO | PR:P0AA93 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AA93 | |
| GO | GO:0016021 GO:0005886 GO:0005524 GO:0000155 GO:0071555 GO:0031670 GO:0000160 GO:0023014 | |
| Gene3D | 3.30.565.10 | |
| InterPro | IPR003018 IPR029016 IPR003594 IPR010559 IPR011620 | |
| Pfam | PF07694 PF02518 PF06580 | |
| SMART | SM00065 SM00387 | |
| SUPFAM | SSF55781 SSF55874 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0031670 |
cellular response to nutrient |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0023014 |
signal transduction by protein phosphorylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000155 |
phosphorelay sensor kinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0018106 |
peptidyl-histidine phosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004673 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0018106 |
peptidyl-histidine phosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004673 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000155 |
phosphorelay sensor kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004673 |
protein histidine kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071555 |
cell wall organization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004673 |
protein histidine kinase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-1003 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Fried, L et al. (2013) Identification of a target gene and activating stimulus for the YpdA/YpdB histidine kinase/response regulator system in Escherichia coli. J. Bacteriol. 195 807-15 PubMed GONUTS page
- ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed GONUTS page
