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ECOLI:YHBJ
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | yhbJ | |
| Protein Name(s) | UPF0042 nucleotide-binding protein YhbJ | |
| External Links | ||
| UniProt | P0A894 | |
| EMBL | Z27094 U12684 U18997 U00096 AP009048 | |
| PIR | I76721 | |
| RefSeq | NP_417672.1 YP_491390.1 | |
| ProteinModelPortal | P0A894 | |
| DIP | DIP-35927N | |
| IntAct | P0A894 | |
| MINT | MINT-1232648 | |
| STRING | 511145.b3205 | |
| PaxDb | P0A894 | |
| PRIDE | P0A894 | |
| EnsemblBacteria | AAC76237 BAE77249 | |
| GeneID | 12930291 947727 | |
| KEGG | ecj:Y75_p3125 eco:b3205 | |
| PATRIC | 32121830 | |
| EchoBASE | EB2066 | |
| EcoGene | EG12146 | |
| eggNOG | COG1660 | |
| HOGENOM | HOG000244885 | |
| InParanoid | P0A894 | |
| KO | K06958 | |
| OMA | PNPHWVP | |
| OrthoDB | EOG6WHNW8 | |
| PhylomeDB | P0A894 | |
| BioCyc | EcoCyc:EG12146-MONOMER ECOL316407:JW3172-MONOMER | |
| PRO | PR:P0A894 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0A894 | |
| GO | GO:0005524 GO:0005525 GO:0042802 GO:0003723 GO:0048518 GO:0006396 | |
| Gene3D | 3.40.50.300 | |
| HAMAP | MF_00636 | |
| InterPro | IPR005337 IPR027417 | |
| Pfam | PF03668 | |
| PIRSF | PIRSF005052 | |
| SUPFAM | SSF52540 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006396 |
RNA processing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098251 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098251 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Resch, M et al. (2013) Crystallization and preliminary X-ray diffraction analysis of YhbJ from Escherichia coli, a key protein involved in the GlmYZ sRNA regulatory cascade. Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 69 109-14 PubMed GONUTS page
- ↑ Kalamorz, F et al. (2007) Feedback control of glucosamine-6-phosphate synthase GlmS expression depends on the small RNA GlmZ and involves the novel protein YhbJ in Escherichia coli. Mol. Microbiol. 65 1518-33 PubMed GONUTS page
- ↑ Göpel, Y et al. (2013) Targeted decay of a regulatory small RNA by an adaptor protein for RNase E and counteraction by an anti-adaptor RNA. Genes Dev. 27 552-64 PubMed GONUTS page
