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ECOLI:YFBR
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | yfbR | |
| Protein Name(s) | 5'-nucleotidase YfbR
5'-deoxyribonucleotidase Nucleoside 5'-monophosphate phosphohydrolase | |
| External Links | ||
| UniProt | P76491 | |
| EMBL | U00096 AP009048 | |
| PIR | A65001 | |
| RefSeq | NP_416794.1 YP_490533.1 | |
| PDB | 2PAQ 2PAR 2PAU | |
| PDBsum | 2PAQ 2PAR 2PAU | |
| ProteinModelPortal | P76491 | |
| SMR | P76491 | |
| DIP | DIP-28107N | |
| IntAct | P76491 | |
| STRING | 511145.b2291 | |
| PaxDb | P76491 | |
| PRIDE | P76491 | |
| EnsemblBacteria | AAC75351 BAE76684 | |
| GeneID | 12933975 946771 | |
| KEGG | ecj:Y75_p2257 eco:b2291 | |
| PATRIC | 32119951 | |
| EchoBASE | EB3855 | |
| EcoGene | EG14102 | |
| eggNOG | COG1896 | |
| HOGENOM | HOG000276964 | |
| KO | K08722 | |
| OMA | MPTPIKY | |
| ProtClustDB | PRK03826 | |
| BioCyc | EcoCyc:G7185-MONOMER ECOL316407:JW2288-MONOMER MetaCyc:G7185-MONOMER | |
| BRENDA | 3.1.3.5 | |
| SABIO-RK | P76491 | |
| EvolutionaryTrace | P76491 | |
| Genevestigator | P76491 | |
| GO | GO:0005737 GO:0008253 GO:0050897 GO:0008252 GO:0000166 GO:0008081 GO:0006226 | |
| Gene3D | 1.10.3210.10 | |
| HAMAP | MF_01100 | |
| InterPro | IPR022971 IPR003607 IPR006674 | |
| Pfam | PF01966 | |
| SMART | SM00471 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0010139 |
pyrimidine deoxyribonucleotide salvage |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG14102 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006226 |
dUMP biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG14102 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0050897 |
cobalt ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010139 |
pyrimidine deoxyribonucleotide salvage |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006226 |
dUMP biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0002953 |
5'-deoxynucleotidase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016311 |
dephosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0002953 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016311 |
dephosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0016791 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016311 |
dephosphorylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0002953 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0002953 |
5'-deoxynucleotidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016791 |
phosphatase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000028593 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Proudfoot, M et al. (2004) General enzymatic screens identify three new nucleotidases in Escherichia coli. Biochemical characterization of SurE, YfbR, and YjjG. J. Biol. Chem. 279 54687-94 PubMed GONUTS page
- ↑ 3.0 3.1 Weiss, B (2007) The deoxycytidine pathway for thymidylate synthesis in Escherichia coli. J. Bacteriol. 189 7922-6 PubMed GONUTS page
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