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ECOLI:YCGR
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | ycgR | |
Protein Name(s) | Flagellar brake protein YcgR
Cyclic di-GMP binding protein YcgR | |
External Links | ||
UniProt | P76010 | |
EMBL | U00096 AP009048 | |
PIR | G64865 | |
RefSeq | NP_415712.1 YP_489461.1 | |
ProteinModelPortal | P76010 | |
SMR | P76010 | |
DIP | DIP-11561N | |
IntAct | P76010 | |
STRING | 511145.b1194 | |
PRIDE | P76010 | |
EnsemblBacteria | AAC74278 BAA36052 | |
GeneID | 12931864 947609 | |
KEGG | ecj:Y75_p1166 eco:b1194 | |
PATRIC | 32117636 | |
EchoBASE | EB3658 | |
EcoGene | EG13899 | |
eggNOG | COG5581 | |
HOGENOM | HOG000265609 | |
OMA | AGLHEGM | |
OrthoDB | EOG6SNDRB | |
BioCyc | EcoCyc:G6623-MONOMER ECOL316407:JW1183-MONOMER | |
PRO | PR:P76010 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P76010 | |
GO | GO:0009425 GO:0035438 GO:0010181 GO:0016491 GO:0071973 GO:0071945 GO:0051270 | |
Gene3D | 2.30.110.10 | |
HAMAP | MF_01457 | |
InterPro | IPR009875 IPR012349 IPR023787 IPR009926 | |
Pfam | PF07238 PF07317 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0071945 |
regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
Missing: with/from | |||
enables |
GO:0035438 |
cyclic-di-GMP binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
GO:0035438 |
cyclic-di-GMP binding |
ECO:0000314 |
F |
Figure 1. Bottom panel shows a putative ( possible, but unpurified protein) protein for the c-di-GMP-binding domain; PilZN. |
complete | |||||
involved_in |
GO:0071973 |
bacterial-type flagellum-dependent cell motility |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035438 |
cyclic-di-GMP binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035438 |
cyclic-di-GMP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071945 |
regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071945 |
regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000054561 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0035438 |
cyclic-di-GMP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000054561 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071973 |
bacterial-type flagellum-dependent cell motility |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000054561 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0009288 |
bacterial-type flagellum |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0009425 |
bacterial-type flagellum basal body |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Paul, K et al. (2010) The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism. Mol. Cell 38 128-39 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Ryjenkov, DA et al. (2006) The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria. J. Biol. Chem. 281 30310-4 PubMed GONUTS page
- ↑ Ko, M & Park, C (2000) Two novel flagellar components and H-NS are involved in the motor function of Escherichia coli. J. Mol. Biol. 303 371-82 PubMed GONUTS page