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ECOLI:YCGR

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Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) ycgR
Protein Name(s) Flagellar brake protein YcgR

Cyclic di-GMP binding protein YcgR

External Links
UniProt P76010
EMBL U00096
AP009048
PIR G64865
RefSeq NP_415712.1
YP_489461.1
ProteinModelPortal P76010
SMR P76010
DIP DIP-11561N
IntAct P76010
STRING 511145.b1194
PRIDE P76010
EnsemblBacteria AAC74278
BAA36052
GeneID 12931864
947609
KEGG ecj:Y75_p1166
eco:b1194
PATRIC 32117636
EchoBASE EB3658
EcoGene EG13899
eggNOG COG5581
HOGENOM HOG000265609
OMA AGLHEGM
OrthoDB EOG6SNDRB
BioCyc EcoCyc:G6623-MONOMER
ECOL316407:JW1183-MONOMER
PRO PR:P76010
Proteomes UP000000318
UP000000625
Genevestigator P76010
GO GO:0009425
GO:0035438
GO:0010181
GO:0016491
GO:0071973
GO:0071945
GO:0051270
Gene3D 2.30.110.10
HAMAP MF_01457
InterPro IPR009875
IPR012349
IPR023787
IPR009926
Pfam PF07238
PF07317

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0071945

regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed

PMID:20346719[1]

ECO:0000316

genetic interaction evidence used in manual assertion

P

Seeded From UniProt

Missing: with/from

enables

GO:0035438

cyclic-di-GMP binding

PMID:16920715[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

GO:0035438

cyclic-di-GMP binding

PMID:16920715[2]

ECO:0000314

F

Figure 1. Bottom panel shows a putative ( possible, but unpurified protein) protein for the c-di-GMP-binding domain; PilZN.

complete

involved_in

GO:0071973

bacterial-type flagellum-dependent cell motility

PMID:11031114[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0035438

cyclic-di-GMP binding

PMID:16920715[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0035438

cyclic-di-GMP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009875
InterPro:IPR023787

F

Seeded From UniProt

complete

involved_in

GO:0071945

regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR023787

P

Seeded From UniProt

complete

involved_in

GO:0071945

regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000054561

P

Seeded From UniProt

complete

enables

GO:0035438

cyclic-di-GMP binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000054561

F

Seeded From UniProt

complete

involved_in

GO:0071973

bacterial-type flagellum-dependent cell motility

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000054561

P

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0009288

bacterial-type flagellum

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0975

C

Seeded From UniProt

complete

part_of

GO:0009425

bacterial-type flagellum basal body

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0142

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Paul, K et al. (2010) The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism. Mol. Cell 38 128-39 PubMed GONUTS page
  2. 2.0 2.1 2.2 Ryjenkov, DA et al. (2006) The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria. J. Biol. Chem. 281 30310-4 PubMed GONUTS page
  3. Ko, M & Park, C (2000) Two novel flagellar components and H-NS are involved in the motor function of Escherichia coli. J. Mol. Biol. 303 371-82 PubMed GONUTS page