GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECOLI:WZZE

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) wzzE (synonyms: wzz, yifC)
Protein Name(s) Lipopolysaccharide biosynthesis protein WzzE
External Links
UniProt P0AG00
EMBL M87049
M76129
U00096
AP009048
PIR D65182
RefSeq NP_418232.2
YP_491654.1
ProteinModelPortal P0AG00
SMR P0AG00
STRING 511145.b3785
PaxDb P0AG00
EnsemblBacteria AAC76790
BAE77513
GeneID 12930704
944815
KEGG ecj:Y75_p3390
eco:b3785
PATRIC 32123063
EchoBASE EB1272
EcoGene EG11295
eggNOG COG3765
HOGENOM HOG000126437
InParanoid P0AG00
KO K05790
OMA DIRGLCC
OrthoDB EOG6F81MJ
PhylomeDB P0AG00
BioCyc EcoCyc:EG11295-MONOMER
ECOL316407:JW5601-MONOMER
MetaCyc:EG11295-MONOMER
PRO PR:P0AG00
Proteomes UP000000318
UP000000625
Genevestigator P0AG00
GO GO:0016021
GO:0005886
GO:0009246
GO:0009103
InterPro IPR003856
Pfam PF02706

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005886

plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10297
EcoGene:EG11826
EcoGene:EG13568
PANTHER:PTN000794252
UniProtKB:G3XCY2
UniProtKB:Q9I520

C

Seeded From UniProt

complete

enables

GO:0004713

protein tyrosine kinase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11826
EcoGene:EG13568
PANTHER:PTN000794252

F

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

PMID:10515954[2]

ECO:0000245

automatically integrated combinatorial evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0009246

enterobacterial common antigen biosynthetic process

PMID:10515954[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0018108

peptidyl-tyrosine phosphorylation

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0004713

P

Seeded From UniProt

complete

involved_in

GO:0009103

lipopolysaccharide biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003856

P

Seeded From UniProt

complete

involved_in

GO:0009246

enterobacterial common antigen biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032895

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003856

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032895

C

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000165737

C

Seeded From UniProt

complete

involved_in

GO:0009246

enterobacterial common antigen biosynthetic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000165737

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0997
UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0037

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0009246

enterobacterial common antigen biosynthetic process

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00566

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. 2.0 2.1 Barr, K et al. (1999) The modality of enterobacterial common antigen polysaccharide chain lengths is regulated by o349 of the wec gene cluster of Escherichia coli K-12. J. Bacteriol. 181 6564-8 PubMed GONUTS page