GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:ULAD
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | ulaD (synonyms: sgaH, yjfV) | |
| Protein Name(s) | 3-keto-L-gulonate-6-phosphate decarboxylase UlaD
3-dehydro-L-gulonate-6-phosphate decarboxylase KGPDC L-ascorbate utilization protein D | |
| External Links | ||
| UniProt | P39304 | |
| EMBL | U14003 U00096 AP009048 | |
| PIR | S56421 | |
| RefSeq | NP_418617.1 YP_492338.1 | |
| PDB | 1KV8 1KW1 1Q6L 1Q6O 1Q6Q 1Q6R 1SO3 1SO4 1SO5 1SO6 1XBV 1XBX 1XBY 1XBZ | |
| PDBsum | 1KV8 1KW1 1Q6L 1Q6O 1Q6Q 1Q6R 1SO3 1SO4 1SO5 1SO6 1XBV 1XBX 1XBY 1XBZ | |
| ProteinModelPortal | P39304 | |
| SMR | P39304 | |
| DIP | DIP-10869N | |
| IntAct | P39304 | |
| STRING | 511145.b4196 | |
| SWISS-2DPAGE | P39304 | |
| PRIDE | P39304 | |
| EnsemblBacteria | AAC77153 BAE78197 | |
| GeneID | 12933006 948714 | |
| KEGG | ecj:Y75_p4082 eco:b4196 | |
| PATRIC | 32123967 | |
| EchoBASE | EB2389 | |
| EcoGene | EG12496 | |
| eggNOG | COG0269 | |
| HOGENOM | HOG000226068 | |
| InParanoid | P39304 | |
| KO | K03078 | |
| OMA | TIPTMKA | |
| OrthoDB | EOG66B435 | |
| PhylomeDB | P39304 | |
| BioCyc | EcoCyc:G7858-MONOMER ECOL316407:JW4154-MONOMER MetaCyc:G7858-MONOMER | |
| SABIO-RK | P39304 | |
| UniPathway | UPA00263 | |
| EvolutionaryTrace | P39304 | |
| PRO | PR:P39304 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P39304 | |
| GO | GO:0033982 GO:0000287 GO:0004590 GO:0006207 GO:0019854 | |
| Gene3D | 3.20.20.70 | |
| HAMAP | MF_01267 | |
| InterPro | IPR023942 IPR013785 IPR001754 IPR011060 | |
| Pfam | PF00215 | |
| SMART | SM00934 | |
| SUPFAM | SSF51366 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0033982 |
3-dehydro-L-gulonate-6-phosphate decarboxylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12285 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019854 |
L-ascorbic acid catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12496 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0033982 |
3-dehydro-L-gulonate-6-phosphate decarboxylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019854 |
L-ascorbic acid catabolic process |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004590 |
orotidine-5'-phosphate decarboxylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006207 |
'de novo' pyrimidine nucleobase biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019854 |
L-ascorbic acid catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0033982 |
3-dehydro-L-gulonate-6-phosphate decarboxylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0033982 |
3-dehydro-L-gulonate-6-phosphate decarboxylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019854 |
L-ascorbic acid catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000101594 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000101594 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016831 |
carboxy-lyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000101594 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016831 |
carboxy-lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019854 |
L-ascorbic acid catabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00263 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Yew, WS & Gerlt, JA (2002) Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons. J. Bacteriol. 184 302-6 PubMed GONUTS page
- ↑ Campos, E et al. (2004) Regulation of expression of the divergent ulaG and ulaABCDEF operons involved in LaAscorbate dissimilation in Escherichia coli. J. Bacteriol. 186 1720-8 PubMed GONUTS page
- ↑ Wise, E et al. (2002) Homologous (beta/alpha)8-barrel enzymes that catalyze unrelated reactions: orotidine 5'-monophosphate decarboxylase and 3-keto-L-gulonate 6-phosphate decarboxylase. Biochemistry 41 3861-9 PubMed GONUTS page
