GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:TREC
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | treC (synonyms: olgH) | |
| Protein Name(s) | Trehalose-6-phosphate hydrolase
Alpha,alpha-phosphotrehalase | |
| External Links | ||
| UniProt | P28904 | |
| EMBL | U06195 U14003 U00096 AP009048 L06097 | |
| PIR | S56465 | |
| RefSeq | NP_418660.1 YP_492379.1 | |
| ProteinModelPortal | P28904 | |
| SMR | P28904 | |
| DIP | DIP-11024N | |
| IntAct | P28904 | |
| STRING | 511145.b4239 | |
| CAZy | GH13 | |
| PaxDb | P28904 | |
| PRIDE | P28904 | |
| EnsemblBacteria | AAC77196 BAE78238 | |
| GeneID | 12930325 948762 | |
| KEGG | ecj:Y75_p4124 eco:b4239 | |
| PATRIC | 32124053 | |
| EchoBASE | EB1374 | |
| EcoGene | EG11402 | |
| eggNOG | COG0366 | |
| HOGENOM | HOG000220641 | |
| InParanoid | P28904 | |
| KO | K01226 | |
| OMA | SALFWCN | |
| OrthoDB | EOG6RVFV2 | |
| PhylomeDB | P28904 | |
| BioCyc | EcoCyc:TRE6PHYDRO-MONOMER ECOL316407:JW4198-MONOMER MetaCyc:TRE6PHYDRO-MONOMER | |
| PRO | PR:P28904 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P28904 | |
| GO | GO:0005737 GO:0008788 GO:0043169 GO:0006974 GO:0005993 | |
| Gene3D | 2.60.40.1180 3.20.20.80 | |
| InterPro | IPR022567 IPR015902 IPR013780 IPR006047 IPR006589 IPR013781 IPR017853 IPR012769 | |
| PANTHER | PTHR10357 | |
| Pfam | PF00128 PF11941 | |
| SMART | SM00642 | |
| SUPFAM | SSF51445 | |
| TIGRFAMs | TIGR02403 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0009313 |
oligosaccharide catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000040102 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004556 |
alpha-amylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000040102 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008788 |
alpha,alpha-phosphotrehalase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005993 |
trehalose catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005993 |
trehalose catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008788 |
alpha,alpha-phosphotrehalase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008788 |
alpha,alpha-phosphotrehalase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Khil, PP & Camerini-Otero, RD (2002) Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. 44 89-105 PubMed GONUTS page
- ↑ Rimmele, M & Boos, W (1994) Trehalose-6-phosphate hydrolase of Escherichia coli. J. Bacteriol. 176 5654-64 PubMed GONUTS page
- ↑ Boos, W et al. (1990) Trehalose transport and metabolism in Escherichia coli. J. Bacteriol. 172 3450-61 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
