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ECOLI:RUTF
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | rutF (synonyms: ycdH) | |
| Protein Name(s) | FMN reductase (NADH) RutF
FMN reductase NADH-flavin reductase RutF NADH:flavin oxidoreductase | |
| External Links | ||
| UniProt | P75893 | |
| EMBL | U00096 AP009048 | |
| PIR | E64842 | |
| RefSeq | NP_415527.4 YP_489280.1 | |
| ProteinModelPortal | P75893 | |
| SMR | P75893 | |
| STRING | 511145.b1007 | |
| EnsemblBacteria | AAC74092 BAA35774 | |
| GeneID | 12930554 946594 | |
| KEGG | ecj:Y75_p0980 eco:b1007 | |
| PATRIC | 32117243 | |
| EchoBASE | EB3614 | |
| EcoGene | EG13854 | |
| eggNOG | COG1853 | |
| HOGENOM | HOG000115783 | |
| InParanoid | P75893 | |
| KO | K09024 | |
| OMA | THTIVIA | |
| OrthoDB | EOG6T1WSH | |
| PhylomeDB | P75893 | |
| BioCyc | EcoCyc:G6518-MONOMER ECOL316407:JW5138-MONOMER MetaCyc:G6518-MONOMER | |
| PRO | PR:P75893 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P75893 | |
| GO | GO:0010181 GO:0008752 GO:0042602 GO:0019740 GO:0006208 GO:0006212 | |
| Gene3D | 2.30.110.10 | |
| HAMAP | MF_00833 | |
| InterPro | IPR002563 IPR019917 IPR012349 | |
| Pfam | PF01613 | |
| SMART | SM00903 | |
| SUPFAM | SSF50475 | |
| TIGRFAMs | TIGR03615 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0042602 |
riboflavin reductase (NADPH) activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019740 |
nitrogen utilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006212 |
uracil catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042602 |
riboflavin reductase (NADPH) activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13854 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016646 |
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001576838 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006208 |
pyrimidine nucleobase catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13854 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042602 |
riboflavin reductase (NADPH) activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019740 |
nitrogen utilization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006212 |
uracil catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006208 |
pyrimidine nucleobase catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008752 |
FMN reductase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0010181 |
FMN binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0048037 |
cofactor binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042602 |
riboflavin reductase (NADPH) activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100307 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019740 |
nitrogen utilization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100307 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006212 |
uracil catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100307 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Kim, KS et al. (2010) The Rut pathway for pyrimidine degradation: novel chemistry and toxicity problems. J. Bacteriol. 192 4089-102 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Loh, KD et al. (2006) A previously undescribed pathway for pyrimidine catabolism. Proc. Natl. Acad. Sci. U.S.A. 103 5114-9 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
