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ECOLI:RSGA
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | rsgA (synonyms: engC, yjeQ) | |
| Protein Name(s) | Putative ribosome biogenesis GTPase RsgA | |
| External Links | ||
| UniProt | P39286 | |
| EMBL | U14003 U00096 AP009048 | |
| PIR | S56389 | |
| RefSeq | NP_418585.4 YP_492306.1 | |
| PDB | 2YKR 4A2I | |
| PDBsum | 2YKR 4A2I | |
| ProteinModelPortal | P39286 | |
| SMR | P39286 | |
| DIP | DIP-12581N | |
| IntAct | P39286 | |
| MINT | MINT-7290812 | |
| STRING | 511145.b4161 | |
| PaxDb | P39286 | |
| PRIDE | P39286 | |
| EnsemblBacteria | AAC77121 BAE78165 | |
| GeneID | 12932086 948674 | |
| KEGG | ecj:Y75_p4050 eco:b4161 | |
| PATRIC | 32123895 | |
| EchoBASE | EB2372 | |
| EcoGene | EG12479 | |
| eggNOG | COG1162 | |
| HOGENOM | HOG000006957 | |
| InParanoid | P39286 | |
| KO | K06949 | |
| OMA | KYCFPEF | |
| OrthoDB | EOG69SKDD | |
| PhylomeDB | P39286 | |
| BioCyc | EcoCyc:G7841-MONOMER ECOL316407:JW4122-MONOMER MetaCyc:G7841-MONOMER | |
| EvolutionaryTrace | P39286 | |
| PRO | PR:P39286 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P39286 | |
| GO | GO:0019003 GO:0005525 GO:0003924 GO:0046872 GO:0006184 GO:0042274 | |
| Gene3D | 3.40.50.300 | |
| HAMAP | MF_01820 | |
| InterPro | IPR010914 IPR030378 IPR027417 IPR004881 | |
| Pfam | PF03193 | |
| SUPFAM | SSF52540 | |
| TIGRFAMs | TIGR00157 | |
| PROSITE | PS50936 PS51721 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0042274 |
ribosomal small subunit biogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019003 |
GDP binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000335012 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000335012 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000335012 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042274 |
ribosomal small subunit biogenesis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000335012 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019843 |
rRNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042254 |
ribosome biogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Jomaa, A et al. (2011) Understanding ribosome assembly: the structure of in vivo assembled immature 30S subunits revealed by cryo-electron microscopy. RNA 17 697-709 PubMed GONUTS page
- ↑ 2.0 2.1 Daigle, DM et al. (2002) YjeQ, an essential, conserved, uncharacterized protein from Escherichia coli, is an unusual GTPase with circularly permuted G-motifs and marked burst kinetics. Biochemistry 41 11109-17 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
