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ECOLI:RECN
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | recN (synonyms: radB) | |
| Protein Name(s) | DNA repair protein RecN
Recombination protein N | |
| External Links | ||
| UniProt | P05824 | |
| EMBL | Y00357 U36840 U00096 AP009048 | |
| PIR | C65040 | |
| RefSeq | YP_026172.1 YP_490838.1 | |
| ProteinModelPortal | P05824 | |
| SMR | P05824 | |
| DIP | DIP-10655N | |
| IntAct | P05824 | |
| MINT | MINT-1269449 | |
| STRING | 511145.b2616 | |
| PaxDb | P05824 | |
| EnsemblBacteria | AAT48145 BAA16501 | |
| GeneID | 12934405 947105 | |
| KEGG | ecj:Y75_p2563 eco:b2616 | |
| PATRIC | 32120631 | |
| EchoBASE | EB0824 | |
| EcoGene | EG10831 | |
| eggNOG | COG0497 | |
| HOGENOM | HOG000009327 | |
| InParanoid | P05824 | |
| KO | K03631 | |
| OMA | QVICVTH | |
| OrthoDB | EOG6WQD34 | |
| PhylomeDB | P05824 | |
| BioCyc | EcoCyc:EG10831-MONOMER ECOL316407:JW5416-MONOMER | |
| PRO | PR:P05824 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P05824 | |
| GO | GO:0005737 GO:0005524 GO:0006974 GO:0006302 GO:0000724 GO:0009432 | |
| Gene3D | 3.40.50.300 | |
| InterPro | IPR004604 IPR027417 IPR003395 | |
| PANTHER | PTHR11059 | |
| Pfam | PF02463 | |
| PIRSF | PIRSF003128 | |
| SUPFAM | SSF52540 | |
| TIGRFAMs | TIGR00634 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10831 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009314 |
response to radiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10831 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10831 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009314 |
response to radiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Khil, PP & Camerini-Otero, RD (2002) Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. 44 89-105 PubMed GONUTS page
- ↑ Finch, PW et al. (1985) Identification of the Escherichia coli recN gene product as a major SOS protein. J. Bacteriol. 164 653-8 PubMed GONUTS page
- ↑ Sargentini, NJ et al. () Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Mutat. Res. 793-794 1-14 PubMed GONUTS page
- ↑ Picksley, SM et al. (1984) Repair of DNA double-strand breaks in Escherichia coli K12 requires a functional recN product. Mol. Gen. Genet. 195 267-74 PubMed GONUTS page
- ↑ Meddows, TR et al. (2005) RecN protein and transcription factor DksA combine to promote faithful recombinational repair of DNA double-strand breaks. Mol. Microbiol. 57 97-110 PubMed GONUTS page
- ↑ Cupido, M & Bridges, BA (1985) Uvr-independent repair of 8-methoxypsoralen crosslinks in Escherichia coli: evidence for a recombinational process. Mutat. Res. 146 135-41 PubMed GONUTS page
