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ECOLI:RDGC
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | rdgC (synonyms: yaiD) | |
| Protein Name(s) | Recombination-associated protein RdgC | |
| External Links | ||
| UniProt | P36767 | |
| EMBL | X76979 U73857 U00096 AP009048 | |
| PIR | S41303 | |
| RefSeq | NP_414927.1 YP_488686.1 | |
| PDB | 2OWL | |
| PDBsum | 2OWL | |
| ProteinModelPortal | P36767 | |
| SMR | P36767 | |
| DIP | DIP-10649N | |
| IntAct | P36767 | |
| STRING | 511145.b0393 | |
| PaxDb | P36767 | |
| PRIDE | P36767 | |
| EnsemblBacteria | AAC73496 BAE76174 | |
| GeneID | 12934196 948585 | |
| KEGG | ecj:Y75_p0382 eco:b0393 | |
| PATRIC | 32115929 | |
| EchoBASE | EB2078 | |
| EcoGene | EG12158 | |
| eggNOG | COG2974 | |
| HOGENOM | HOG000117544 | |
| InParanoid | P36767 | |
| KO | K03554 | |
| OMA | QILICAR | |
| OrthoDB | EOG6WX4MD | |
| PhylomeDB | P36767 | |
| BioCyc | EcoCyc:EG12158-MONOMER ECOL316407:JW0384-MONOMER | |
| EvolutionaryTrace | P36767 | |
| PRO | PR:P36767 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P36767 | |
| GO | GO:0043590 GO:0005737 GO:0003690 GO:0003697 GO:0006310 GO:0000018 | |
| HAMAP | MF_00194 | |
| InterPro | IPR007476 | |
| Pfam | PF04381 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0043590 |
bacterial nucleoid |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12158 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003690 |
double-stranded DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12158 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000018 |
regulation of DNA recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12158 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0043590 |
bacterial nucleoid |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003690 |
double-stranded DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000018 |
regulation of DNA recombination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000034375 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000034375 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009295 |
nucleoid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Murphy, LD et al. (1999) Identification of two new proteins in spermidine nucleoids isolated from Escherichia coli. J. Bacteriol. 181 3842-4 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
- ↑ 4.0 4.1 Moore, T et al. (2003) The RdgC protein of Escherichia coli binds DNA and counters a toxic effect of RecFOR in strains lacking the replication restart protein PriA. EMBO J. 22 735-45 PubMed GONUTS page
- ↑ Drees, JC et al. (2006) Inhibition of RecA protein function by the RdgC protein from Escherichia coli. J. Biol. Chem. 281 4708-17 PubMed GONUTS page
