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ECOLI:RBSK
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | rbsK | |
Protein Name(s) | Ribokinase | |
External Links | ||
UniProt | P0A9J6 | |
EMBL | M13169 L10328 U00096 AP009048 | |
PIR | A26305 | |
RefSeq | NP_418208.1 YP_491677.1 | |
PDB | 1GQT 1RK2 1RKA 1RKD 1RKS | |
PDBsum | 1GQT 1RK2 1RKA 1RKD 1RKS | |
ProteinModelPortal | P0A9J6 | |
SMR | P0A9J6 | |
DIP | DIP-36178N | |
IntAct | P0A9J6 | |
MINT | MINT-1321131 | |
STRING | 511145.b3752 | |
BindingDB | P0A9J6 | |
ChEMBL | CHEMBL5093 | |
PRIDE | P0A9J6 | |
EnsemblBacteria | AAC76775 BAE77536 | |
GeneID | 12930588 948260 | |
KEGG | ecj:Y75_p3415 eco:b3752 | |
PATRIC | 32123003 | |
EchoBASE | EB0811 | |
EcoGene | EG10818 | |
eggNOG | COG0524 | |
HOGENOM | HOG000235950 | |
InParanoid | P0A9J6 | |
KO | K00852 | |
OMA | NGALMTA | |
OrthoDB | EOG64JFMD | |
PhylomeDB | P0A9J6 | |
BioCyc | EcoCyc:RIBOKIN-MONOMER ECOL316407:JW3731-MONOMER MetaCyc:RIBOKIN-MONOMER RETL1328306-WGS:GSTH-416-MONOMER RETL1328306-WGS:GSTH-5050-MONOMER | |
UniPathway | UPA00916 | |
EvolutionaryTrace | P0A9J6 | |
PRO | PR:P0A9J6 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P0A9J6 | |
GO | GO:0005737 GO:0005524 GO:0004747 GO:0046835 GO:0019303 | |
Gene3D | 3.40.1190.20 | |
InterPro | IPR002173 IPR011877 IPR011611 IPR002139 IPR029056 | |
Pfam | PF00294 | |
PRINTS | PR00990 | |
SUPFAM | SSF53613 | |
TIGRFAMs | TIGR02152 | |
PROSITE | PS00584 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0046835 |
carbohydrate phosphorylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11848 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10818 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019303 |
D-ribose catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004747 |
ribokinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004747 |
ribokinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006014 |
D-ribose metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016301 |
kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016773 |
phosphotransferase activity, alcohol group as acceptor |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004747 |
ribokinase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004747 |
ribokinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000288877 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046835 |
carbohydrate phosphorylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000288877 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019303 |
D-ribose catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000288877 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000288877 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000288877 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019303 |
D-ribose catabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00916 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Anderson, A & Cooper, RA (1969) The significance of ribokinase for ribose utilization by Escherichia coli. Biochim. Biophys. Acta 177 163-5 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
- ↑ Lopez-Campistrous, A et al. (2005) Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth. Mol. Cell Proteomics 4 1205-9 PubMed GONUTS page
- ↑ Hope, JN et al. (1986) Ribokinase from Escherichia coli K12. Nucleotide sequence and overexpression of the rbsK gene and purification of ribokinase. J. Biol. Chem. 261 7663-8 PubMed GONUTS page