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ECOLI:PHOB
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | phoB | |
| Protein Name(s) | Phosphate regulon transcriptional regulatory protein PhoB | |
| External Links | ||
| UniProt | P0AFJ5 | |
| EMBL | X04026 U73857 U00096 AP009048 | |
| PIR | A24256 | |
| RefSeq | NP_414933.1 YP_488691.1 | |
| PDB | 1B00 1GXP 1GXQ 1QQI 1ZES 2IYN 2JB9 2JBA 2Z33 3T72 | |
| PDBsum | 1B00 1GXP 1GXQ 1QQI 1ZES 2IYN 2JB9 2JBA 2Z33 3T72 | |
| ProteinModelPortal | P0AFJ5 | |
| SMR | P0AFJ5 | |
| DIP | DIP-35852N | |
| IntAct | P0AFJ5 | |
| MINT | MINT-1313174 | |
| STRING | 511145.b0399 | |
| EnsemblBacteria | AAC73502 BAE76179 | |
| GeneID | 12930822 945046 | |
| KEGG | ecj:Y75_p0387 eco:b0399 | |
| PATRIC | 32115943 | |
| EchoBASE | EB0721 | |
| EcoGene | EG10728 | |
| eggNOG | COG0745 | |
| HOGENOM | HOG000034819 | |
| InParanoid | P0AFJ5 | |
| KO | K07657 | |
| OMA | PMIHTRR | |
| OrthoDB | EOG6G4VQG | |
| PhylomeDB | P0AFJ5 | |
| BioCyc | EcoCyc:PHOB-MONOMER ECOL316407:JW0389-MONOMER | |
| EvolutionaryTrace | P0AFJ5 | |
| PRO | PR:P0AFJ5 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AFJ5 | |
| GO | GO:0005737 GO:0001108 GO:0003677 GO:0042802 GO:0000156 GO:0006817 GO:2000142 GO:0006351 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR011006 IPR001867 IPR011879 IPR001789 IPR011991 | |
| Pfam | PF00072 PF00486 | |
| SMART | SM00448 SM00862 | |
| SUPFAM | SSF52172 | |
| TIGRFAMs | TIGR02154 | |
| PROSITE | PS50110 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10061 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000142 |
regulation of DNA-templated transcription, initiation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001108 |
bacterial-type RNA polymerase holo enzyme binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006817 |
phosphate ion transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006817 |
phosphate ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Rajagopala, SV et al. (2014) The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. 32 285-90 PubMed GONUTS page
- ↑ Gao, R et al. (2008) System-level mapping of Escherichia coli response regulator dimerization with FRET hybrids. Mol. Microbiol. 69 1358-72 PubMed GONUTS page
- ↑ Bachhawat, P et al. (2005) Mechanism of activation for transcription factor PhoB suggested by different modes of dimerization in the inactive and active states. Structure 13 1353-63 PubMed GONUTS page
- ↑ 5.0 5.1 Makino, K et al. (1996) DNA binding of PhoB and its interaction with RNA polymerase. J. Mol. Biol. 259 15-26 PubMed GONUTS page
