ECOLI:PCNB

Species (Taxon ID)	Escherichia coli (strain K12). (83333)
Gene Name(s)	pcnB (ECO:0000255 with HAMAP-Rule:MF_00957)
Protein Name(s)	Poly(A) polymerase I (ECO:0000255 with HAMAP-Rule:MF_00957) PAP I (ECO:0000255 with HAMAP-Rule:MF_00957) Plasmid copy number protein
External Links
UniProt	P0ABF1
EMBL	M20574 U00096 AP009048 S48039
PIR	G64737
RefSeq	NP_414685.4 YP_488446.1
ProteinModelPortal	P0ABF1
SMR	P0ABF1
DIP	DIP-47859N
IntAct	P0ABF1
STRING	511145.b0143
PaxDb	P0ABF1
EnsemblBacteria	AAC73254 BAB96720
GeneID	12934035 947318
KEGG	ecj:Y75_p0140 eco:b0143
PATRIC	32115393
EchoBASE	EB0684
EcoGene	EG10690
eggNOG	COG0617
HOGENOM	HOG000256527
InParanoid	P0ABF1
KO	K00970
OMA	RFMAKLD
OrthoDB	EOG6PZX7Q
PhylomeDB	P0ABF1
BioCyc	EcoCyc:EG10690-MONOMER ECOL316407:JW5808-MONOMER MetaCyc:EG10690-MONOMER
PRO	PR:P0ABF1
Proteomes	UP000000318 UP000000625
Genevestigator	P0ABF1
GO	GO:0005737 GO:0005886 GO:0005524 GO:0004652 GO:0003723 GO:0006378 GO:0006397 GO:0006276 GO:0009451 GO:0006351
HAMAP	MF_00957
InterPro	IPR002646 IPR010206 IPR025866
Pfam	PF01743 PF12626
TIGRFAMs	TIGR01942

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:0009451	RNA modification	PMID:9435023^[1]	ECO:0000316	genetic interaction evidence used in manual assertion	EcoliWiki:cca EcoliWiki:pnp	P	Seeded From UniProt	complete
involved_in	GO:0009451	RNA modification	PMID:17040898^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009451	RNA modification	PMID:10361280^[3]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	PMID:10361280^[3]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006378	mRNA polyadenylation	PMID:17040898^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006276	plasmid maintenance	PMID:2537812^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	PMID:1438224^[5]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	PMID:10361280^[3]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0004652	polynucleotide adenylyltransferase activity	PMID:10361280^[3]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	PMID:10361280^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		F	Seeded From UniProt	complete
part_of	GO:0005829	cytosol	PMID:18304323^[6]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002646 InterPro:IPR010206	F	Seeded From UniProt	complete
enables	GO:0004652	polynucleotide adenylyltransferase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR010206	F	Seeded From UniProt	complete
involved_in	GO:0006378	mRNA polyadenylation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR010206	P	Seeded From UniProt	complete
involved_in	GO:0006396	RNA processing	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002646	P	Seeded From UniProt	complete
enables	GO:0016779	nucleotidyltransferase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002646	F	Seeded From UniProt	complete
enables	GO:0004652	polynucleotide adenylyltransferase activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:2.7.7.19	F	Seeded From UniProt	complete
involved_in	GO:0043631	RNA polyadenylation	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000107055	P	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000107055	F	Seeded From UniProt	complete
enables	GO:0004652	polynucleotide adenylyltransferase activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000107055	F	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000107055	F	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C	Seeded From UniProt	complete
involved_in	GO:0006276	plasmid maintenance	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0615	P	Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0507	P	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0694	F	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000037 GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0997 UniProtKB-KW:KW-1003 UniProtKB-SubCell:SL-0037	C	Seeded From UniProt	complete
enables	GO:0016740	transferase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0808	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0067	F	Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ Mikiewicz, D et al. (1997) Isolation and characterization of a ColE1-like plasmid from Enterobacter agglomerans with a novel variant of rom gene. Plasmid 38 210-9 PubMed GONUTS page
↑ ^2.0 ^2.1 Mohanty, BK & Kushner, SR (2006) The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells. Nucleic Acids Res. 34 5695-704 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 Raynal, LC & Carpousis, AJ (1999) Poly(A) polymerase I of Escherichia coli: characterization of the catalytic domain, an RNA binding site and regions for the interaction with proteins involved in mRNA degradation. Mol. Microbiol. 32 765-75 PubMed GONUTS page
↑ Liu, JD & Parkinson, JS (1989) Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control. J. Bacteriol. 171 1254-61 PubMed GONUTS page
↑ Cao, GJ & Sarkar, N (1992) Identification of the gene for an Escherichia coli poly(A) polymerase. Proc. Natl. Acad. Sci. U.S.A. 89 10380-4 PubMed GONUTS page
↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page

[PMID:9435023-1] Mikiewicz, D et al. (1997) Isolation and characterization of a ColE1-like plasmid from Enterobacter agglomerans with a novel variant of rom gene. Plasmid 38 210-9 PubMed GONUTS page

[PMID:17040898-2] 2.0 ^2.1 Mohanty, BK & Kushner, SR (2006) The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells. Nucleic Acids Res. 34 5695-704 PubMed GONUTS page

[PMID:10361280-3] 3.0 ^3.1 ^3.2 ^3.3 ^3.4 Raynal, LC & Carpousis, AJ (1999) Poly(A) polymerase I of Escherichia coli: characterization of the catalytic domain, an RNA binding site and regions for the interaction with proteins involved in mRNA degradation. Mol. Microbiol. 32 765-75 PubMed GONUTS page

[PMID:2537812-4] Liu, JD & Parkinson, JS (1989) Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control. J. Bacteriol. 171 1254-61 PubMed GONUTS page

[PMID:1438224-5] Cao, GJ & Sarkar, N (1992) Identification of the gene for an Escherichia coli poly(A) polymerase. Proc. Natl. Acad. Sci. U.S.A. 89 10380-4 PubMed GONUTS page

[PMID:18304323-6] Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page

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ECOLI:PCNB

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