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ECOLI:PAAJ
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | paaJ (synonyms: paaE, ydbW) | |
| Protein Name(s) | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | |
| External Links | ||
| UniProt | P0C7L2 | |
| EMBL | U00096 AP009048 | |
| PIR | H64890 | |
| RefSeq | NP_415915.1 YP_489666.1 | |
| ProteinModelPortal | P0C7L2 | |
| SMR | P0C7L2 | |
| IntAct | P0C7L2 | |
| STRING | 511145.b1397 | |
| PRIDE | P0C7L2 | |
| EnsemblBacteria | AAC74479 BAA15002 | |
| GeneID | 12934018 946121 | |
| KEGG | ecj:Y75_p1374 eco:b1397 | |
| PATRIC | 32118080 | |
| EchoBASE | EB3507 | |
| EcoGene | EG13744 | |
| HOGENOM | HOG000012239 | |
| InParanoid | P0C7L2 | |
| KO | K02615 | |
| OMA | MRDAFIC | |
| OrthoDB | EOG68M4GV | |
| PhylomeDB | P0C7L2 | |
| BioCyc | EcoCyc:G6718-MONOMER MetaCyc:G6718-MONOMER | |
| UniPathway | UPA00930 | |
| PRO | PR:P0C7L2 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0C7L2 | |
| GO | GO:0033812 GO:0016740 GO:0006974 GO:0010124 GO:0019619 | |
| Gene3D | 3.40.47.10 | |
| InterPro | IPR012793 IPR002155 IPR016039 IPR016038 IPR020615 IPR020610 IPR020617 IPR020613 IPR020616 | |
| Pfam | PF02803 PF00108 | |
| PIRSF | PIRSF000429 | |
| SUPFAM | SSF53901 | |
| TIGRFAMs | TIGR01930 TIGR02430 | |
| PROSITE | PS00098 PS00737 PS00099 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0033812 |
3-oxoadipyl-CoA thiolase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010124 |
phenylacetate catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010124 |
phenylacetate catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13744 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006635 |
fatty acid beta-oxidation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10278 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003988 |
acetyl-CoA C-acyltransferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10278 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010124 |
phenylacetate catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016747 |
transferase activity, transferring acyl groups other than amino-acyl groups |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR002155 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019619 |
3,4-dihydroxybenzoate catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0033812 |
3-oxoadipyl-CoA thiolase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016746 |
transferase activity, transferring acyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010124 |
phenylacetate catabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00930 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Nogales, J et al. (2007) Characterization of the last step of the aerobic phenylacetic acid degradation pathway. Microbiology (Reading, Engl.) 153 357-65 PubMed GONUTS page
- ↑ Ferrández, A et al. (1998) Catabolism of phenylacetic acid in Escherichia coli. Characterization of a new aerobic hybrid pathway. J. Biol. Chem. 273 25974-86 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Khil, PP & Camerini-Otero, RD (2002) Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. 44 89-105 PubMed GONUTS page
- ↑ Ismail, W et al. (2003) Functional genomics by NMR spectroscopy. Phenylacetate catabolism in Escherichia coli. Eur. J. Biochem. 270 3047-54 PubMed GONUTS page
