GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:OPPC
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | oppC | |
| Protein Name(s) | Oligopeptide transport system permease protein OppC | |
| External Links | ||
| UniProt | P0AFH6 | |
| EMBL | U00096 AP009048 | |
| PIR | H64871 | |
| RefSeq | NP_415761.1 YP_489513.1 | |
| ProteinModelPortal | P0AFH6 | |
| STRING | 511145.b1245 | |
| EnsemblBacteria | AAC74327 BAA14777 | |
| GeneID | 12932375 945810 | |
| KEGG | ecj:Y75_p1219 eco:b1245 | |
| PATRIC | 32117750 | |
| EchoBASE | EB0670 | |
| EcoGene | EG10676 | |
| eggNOG | COG1173 | |
| HOGENOM | HOG000171367 | |
| InParanoid | P0AFH6 | |
| KO | K15582 | |
| OMA | NDGANSM | |
| OrthoDB | EOG6T7N3V | |
| PhylomeDB | P0AFH6 | |
| BioCyc | EcoCyc:OPPC-MONOMER ECOL316407:JW1237-MONOMER MetaCyc:OPPC-MONOMER | |
| PRO | PR:P0AFH6 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AFH6 | |
| GO | GO:0016021 GO:0005886 GO:0015833 GO:0015031 | |
| Gene3D | 1.10.3720.10 | |
| InterPro | IPR000515 IPR025966 | |
| Pfam | PF00528 PF12911 | |
| SUPFAM | SSF161098 | |
| PROSITE | PS50928 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015031 |
protein transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015833 |
peptide transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0997 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Zhang, N et al. (2007) Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics 7 484-93 PubMed GONUTS page
- ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed GONUTS page
