GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:OMPR
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | ompR (synonyms: kmt, ompB) | |
Protein Name(s) | Transcriptional regulatory protein OmpR | |
External Links | ||
UniProt | P0AA16 | |
EMBL | J01656 U18997 U00096 AP009048 | |
PIR | H65135 | |
RefSeq | NP_417864.1 YP_492027.1 | |
PDB | 1ODD 1OPC 2JPB | |
PDBsum | 1ODD 1OPC 2JPB | |
ProteinModelPortal | P0AA16 | |
SMR | P0AA16 | |
DIP | DIP-31859N | |
IntAct | P0AA16 | |
STRING | 511145.b3405 | |
PaxDb | P0AA16 | |
PRIDE | P0AA16 | |
EnsemblBacteria | AAC76430 BAE77886 | |
GeneID | 12932273 947913 | |
KEGG | ecj:Y75_p3771 eco:b3405 | |
PATRIC | 32122246 | |
EchoBASE | EB0666 | |
EcoGene | EG10672 | |
eggNOG | COG0745 | |
HOGENOM | HOG000034819 | |
InParanoid | P0AA16 | |
KO | K07659 | |
OMA | REPMSRD | |
OrthoDB | EOG6G4VQG | |
PhylomeDB | P0AA16 | |
BioCyc | EcoCyc:OMPR-MONOMER ECOL316407:JW3368-MONOMER | |
EvolutionaryTrace | P0AA16 | |
PRO | PR:P0AA16 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P0AA16 | |
GO | GO:0005737 GO:0003677 GO:0000156 GO:0000160 GO:0045893 GO:0006351 | |
Gene3D | 1.10.10.10 | |
InterPro | IPR011006 IPR001867 IPR016032 IPR001789 IPR011991 | |
Pfam | PF00072 PF00486 | |
SMART | SM00448 SM00862 | |
SUPFAM | SSF46894 SSF52172 | |
PROSITE | PS50110 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10061 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Igo, MM et al. (1989) Phosphorylation and dephosphorylation of a bacterial transcriptional activator by a transmembrane receptor. Genes Dev. 3 1725-34 PubMed GONUTS page