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ECOLI:NLPB

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Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) nlpB (synonyms: dapX)
Protein Name(s) Lipoprotein 34
External Links
UniProt P0A903
EMBL X57402
M33928
U00096
AP009048
PIR D65023
RefSeq NP_416972.4
PDB 2LAE
2LAF
2YH5
2YH6
3SNS
3TGO
PDBsum 2LAE
2LAF
2YH5
2YH6
3SNS
3TGO
ProteinModelPortal P0A903
SMR P0A903
IntAct P0A903
TCDB 1.B.33.1.3
SWISS-2DPAGE P0A903
DNASU 946954
EnsemblBacteria EBESCT00000000775
EBESCT00000000776
EBESCT00000015605
GeneID 946954
GenomeReviews AP009048_GR
U00096_GR
KEGG eco:b2477
PATRIC 32120341
EchoBASE EB0652
EcoGene EG10658
eggNOG COG3317
HOGENOM HBG391161
KO K07287
OMA EDKRRYT
ProtClustDB PRK11679
BioCyc EcoCyc:EG10658-MONOMER
EvolutionaryTrace P0A903
Genevestigator P0A903
GO GO:0009279
GO:0005886
InterPro IPR010653
IPR014524
Pfam PF06804
PIRSF PIRSF026343
PROSITE PS51257

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009279

cell outer membrane

PMID:10806384[1]

ECO:0000314

C

Table 1

complete

enables

GO:0042802

identical protein binding

PMID:21586578[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P0A903

F

Seeded From UniProt

complete

involved_in

GO:0043165

Gram-negative-bacterium-type cell outer membrane assembly

PMID:15851030[3]

ECO:0000316

genetic interaction evidence used in manual assertion

EcoliWiki:yaeT
EcoliWiki:yfgL
EcoliWiki:yfiO

P

Seeded From UniProt

complete

part_of

GO:1990063

Bam protein complex

PMID:26900875[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:1990063

Bam protein complex

PMID:26744406[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:1990063

Bam protein complex

PMID:16079137[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

PMID:22683355[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000053590

C

Seeded From UniProt

complete

involved_in

GO:0043165

Gram-negative-bacterium-type cell outer membrane assembly

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000053590

P

Seeded From UniProt

complete

involved_in

GO:0051205

protein insertion into membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000053590

P

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0998
UniProtKB-SubCell:SL-0040

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Molloy, MP et al. (2000) Proteomic analysis of the Escherichia coli outer membrane. Eur. J. Biochem. 267 2871-81 PubMed GONUTS page
  2. Albrecht, R & Zeth, K (2011) Structural basis of outer membrane protein biogenesis in bacteria. J. Biol. Chem. 286 27792-803 PubMed GONUTS page
  3. Wu, T et al. (2005) Identification of a multicomponent complex required for outer membrane biogenesis in Escherichia coli. Cell 121 235-45 PubMed GONUTS page
  4. Han, L et al. (2016) Structure of the BAM complex and its implications for biogenesis of outer-membrane proteins. Nat. Struct. Mol. Biol. 23 192-6 PubMed GONUTS page
  5. Bakelar, J et al. (2016) The structure of the β-barrel assembly machinery complex. Science 351 180-6 PubMed GONUTS page
  6. Stenberg, F et al. (2005) Protein complexes of the Escherichia coli cell envelope. J. Biol. Chem. 280 34409-19 PubMed GONUTS page
  7. Webb, CT et al. (2012) Dynamic association of BAM complex modules includes surface exposure of the lipoprotein BamC. J. Mol. Biol. 422 545-55 PubMed GONUTS page