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ECOLI:NFI
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | nfi (ECO:0000255 with HAMAP-Rule:MF_00801) (synonyms: yjaF) | |
Protein Name(s) | Endonuclease V (ECO:0000255 with HAMAP-Rule:MF_00801)
EndoV Deoxyinosine 3'endonuclease (ECO:0000255 with HAMAP-Rule:MF_00801) Deoxyribonuclease V (ECO:0000255 with HAMAP-Rule:MF_00801) DNase V (ECO:0000255 with HAMAP-Rule:MF_00801) | |
External Links | ||
UniProt | P68739 | |
EMBL | U00006 U00096 AP009048 | |
PIR | A65207 | |
RefSeq | NP_418426.2 YP_491462.1 | |
ProteinModelPortal | P68739 | |
SMR | P68739 | |
DIP | DIP-47986N | |
IntAct | P68739 | |
MINT | MINT-1226598 | |
STRING | 511145.b3998 | |
PaxDb | P68739 | |
PRIDE | P68739 | |
EnsemblBacteria | AAC76972 BAE77321 | |
GeneID | 12934474 948502 | |
KEGG | ecj:Y75_p3198 eco:b3998 | |
PATRIC | 32123519 | |
EchoBASE | EB1859 | |
EcoGene | EG11915 | |
eggNOG | COG1515 | |
HOGENOM | HOG000229135 | |
InParanoid | P68739 | |
KO | K05982 | |
OMA | CDGHGLA | |
OrthoDB | EOG6C0163 | |
PhylomeDB | P68739 | |
BioCyc | EcoCyc:EG11915-MONOMER ECOL316407:JW5547-MONOMER MetaCyc:EG11915-MONOMER | |
PRO | PR:P68739 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P68739 | |
GO | GO:0005737 GO:0043737 GO:0000287 GO:0000737 GO:0006281 | |
HAMAP | MF_00801 | |
InterPro | IPR007581 | |
Pfam | PF04493 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0043737 |
deoxyribonuclease V activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11915 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0016891 |
endoribonuclease activity, producing 5'-phosphomonoesters |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002003280 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003727 |
single-stranded RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002003280 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0043737 |
deoxyribonuclease V activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004519 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004519 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090502 |
RNA phosphodiester bond hydrolysis, endonucleolytic |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0016891 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004519 |
endonuclease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043737 |
deoxyribonuclease V activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043737 |
deoxyribonuclease V activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100223 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100223 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100223 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000100223 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004519 |
endonuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004518 |
nuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Gates, FT 3rd & Linn, S (1977) Endonuclease V of Escherichia coli. J. Biol. Chem. 252 1647-53 PubMed GONUTS page
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