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ECOLI:MENI
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | No Information Provided. (synonyms: ydiI) | |
| Protein Name(s) | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (ECO:0000255 with HAMAP-Rule:MF_01936, ECO:0000305)
DHNA-CoA hydrolase (ECO:0000255 with HAMAP-Rule:MF_01936, ECO:0000305) DHNA-CoA thioesterase (ECO:0000255 with HAMAP-Rule:MF_01936, ECO:0000303 with PMID:23564174[1]) | |
| External Links | ||
| UniProt | P77781 | |
| EMBL | U00096 AP009048 | |
| PIR | F64926 | |
| RefSeq | NP_416201.1 WP_000637982.1 | |
| PDB | 1SBK 1VH5 1VI8 4K49 4K4A 4K4B | |
| PDBsum | 1SBK 1VH5 1VI8 4K49 4K4A 4K4B | |
| ProteinModelPortal | P77781 | |
| SMR | P77781 | |
| BioGrid | 4259131 | |
| DIP | DIP-11750N | |
| IntAct | P77781 | |
| STRING | 511145.b1686 | |
| PaxDb | P77781 | |
| PRIDE | P77781 | |
| EnsemblBacteria | AAC74756 BAA15452 | |
| GeneID | 946190 | |
| KEGG | ecj:JW1676 eco:b1686 | |
| PATRIC | 32118678 | |
| EchoBASE | EB3725 | |
| EcoGene | EG13968 | |
| eggNOG | ENOG4105KA0 COG2050 | |
| HOGENOM | HOG000066991 | |
| InParanoid | P77781 | |
| KO | K19222 | |
| OMA | TQVWQID | |
| OrthoDB | EOG6PGKBS | |
| PhylomeDB | P77781 | |
| BioCyc | EcoCyc:G6912-MONOMER ECOL316407:JW1676-MONOMER MetaCyc:G6912-MONOMER | |
| BRENDA | 3.1.2.2 | |
| UniPathway | UPA00079 UPA01057 | |
| EvolutionaryTrace | P77781 | |
| PRO | PR:P77781 | |
| Proteomes | UP000000318 UP000000625 | |
| GO | GO:0061522 GO:0016289 GO:0016787 GO:0009234 | |
| Gene3D | 3.10.129.10 | |
| HAMAP | MF_01936 | |
| InterPro | IPR029069 IPR030863 IPR003736 IPR006683 | |
| Pfam | PF03061 | |
| SUPFAM | SSF54637 | |
| TIGRFAMs | TIGR00369 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009234 |
menaquinone biosynthetic process |
ECO:0000315 |
P |
(Figure 4a) ydiI mutants produced 67% less menaquinone-8 than the parent strain. |
complete | |||||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0061522 |
1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13968 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016289 |
CoA hydrolase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11105 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13968 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11105 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0061522 |
1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016289 |
CoA hydrolase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0061522 |
1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016790 |
thiolester hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161517 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000161517 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009234 |
menaquinone biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0474 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Chen, M et al. (2013) Identification of a hotdog fold thioesterase involved in the biosynthesis of menaquinone in Escherichia coli. J. Bacteriol. 195 2768-75 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Kuznetsova, E et al. (2005) Enzyme genomics: Application of general enzymatic screens to discover new enzymes. FEMS Microbiol. Rev. 29 263-79 PubMed GONUTS page
- ↑ Latham, JA et al. (2014) Divergence of substrate specificity and function in the Escherichia coli hotdog-fold thioesterase paralogs YdiI and YbdB. Biochemistry 53 4775-87 PubMed GONUTS page
b
