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ECOLI:LPXH
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | lpxH (ECO:0000255 with HAMAP-Rule:MF_00575) (synonyms: ybbF) | |
Protein Name(s) | UDP-2,3-diacylglucosamine hydrolase (ECO:0000255 with HAMAP-Rule:MF_00575)
UDP-2,3-diacylglucosamine diphosphatase (ECO:0000255 with HAMAP-Rule:MF_00575) | |
External Links | ||
UniProt | P43341 | |
EMBL | AF311865 U82664 U00096 AP009048 M19657 | |
PIR | C64784 | |
RefSeq | NP_415057.1 YP_488813.1 | |
ProteinModelPortal | P43341 | |
DIP | DIP-10125N | |
IntAct | P43341 | |
STRING | 511145.b0524 | |
EnsemblBacteria | AAC73626 BAE76301 | |
GeneID | 12933823 949053 | |
KEGG | ecj:Y75_p0510 eco:b0524 | |
PATRIC | 32116208 | |
EchoBASE | EB2532 | |
EcoGene | EG12666 | |
eggNOG | COG2908 | |
HOGENOM | HOG000261930 | |
InParanoid | P43341 | |
KO | K03269 | |
OMA | FMHGNRD | |
OrthoDB | EOG6FNHR2 | |
PhylomeDB | P43341 | |
BioCyc | EcoCyc:EG12666-MONOMER ECOL316407:JW0513-MONOMER MetaCyc:EG12666-MONOMER | |
UniPathway | UPA00359 | |
PRO | PR:P43341 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P43341 | |
GO | GO:0005737 GO:0019897 GO:0008758 GO:0009245 | |
Gene3D | 3.60.21.10 | |
HAMAP | MF_00575 | |
InterPro | IPR004843 IPR029052 IPR010138 | |
Pfam | PF00149 | |
SUPFAM | SSF56300 | |
TIGRFAMs | TIGR01854 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0009245 |
lipid A biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008758 |
UDP-2,3-diacylglucosamine hydrolase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0019897 |
extrinsic component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12666 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009245 |
lipid A biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12666 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008758 |
UDP-2,3-diacylglucosamine hydrolase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12666 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009245 |
lipid A biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008758 |
UDP-2,3-diacylglucosamine hydrolase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0019897 |
extrinsic component of plasma membrane |
ECO:0000269 |
experimental evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009245 |
lipid A biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016462 |
pyrophosphatase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008758 |
UDP-2,3-diacylglucosamine hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000031212 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030145 |
manganese ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000031212 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009245 |
lipid A biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000031212 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0019897 |
extrinsic component of plasma membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000031212 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0997 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009245 |
lipid A biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Babinski, KJ et al. (2002) The Escherichia coli gene encoding the UDP-2,3-diacylglucosamine pyrophosphatase of lipid A biosynthesis. J. Biol. Chem. 277 25937-46 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Babinski, KJ et al. (2002) Accumulation of the lipid A precursor UDP-2,3-diacylglucosamine in an Escherichia coli mutant lacking the lpxH gene. J. Biol. Chem. 277 25947-56 PubMed GONUTS page