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ECOLI:LDCI
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | cadA (synonyms: ldcI) | |
| Protein Name(s) | Lysine decarboxylase, inducible
LDC | |
| External Links | ||
| UniProt | P0A9H3 | |
| EMBL | M76411 U14003 U00096 AP009048 M67452 | |
| PIR | B41842 | |
| RefSeq | NP_418555.1 YP_492275.1 | |
| PDB | 3N75 3Q16 4UPB 4UPF | |
| PDBsum | 3N75 3Q16 4UPB 4UPF | |
| ProteinModelPortal | P0A9H3 | |
| SMR | P0A9H3 | |
| DIP | DIP-35646N | |
| IntAct | P0A9H3 | |
| MINT | MINT-1234345 | |
| STRING | 511145.b4131 | |
| PaxDb | P0A9H3 | |
| EnsemblBacteria | AAC77092 BAE78134 | |
| GeneID | 12931783 948643 | |
| KEGG | ecj:Y75_p4019 eco:b4131 | |
| PATRIC | 32123829 | |
| EchoBASE | EB0129 | |
| EcoGene | EG10131 | |
| eggNOG | COG1982 | |
| HOGENOM | HOG000164394 | |
| InParanoid | P0A9H3 | |
| KO | K01582 | |
| OMA | VKPRVMT | |
| OrthoDB | EOG696BRZ | |
| PhylomeDB | P0A9H3 | |
| BioCyc | EcoCyc:LYSDECARBOX-MONOMER ECOL316407:JW4092-MONOMER MetaCyc:LYSDECARBOX-MONOMER | |
| EvolutionaryTrace | P0A9H3 | |
| PRO | PR:P0A9H3 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0A9H3 | |
| GO | GO:0005737 GO:0042802 GO:0008923 GO:0030170 GO:0006554 | |
| Gene3D | 3.40.640.10 3.90.100.10 3.90.1150.10 | |
| InterPro | IPR005308 IPR011193 IPR000310 IPR008286 IPR015424 IPR015421 IPR015422 | |
| Pfam | PF01276 PF03711 PF03709 | |
| PIRSF | PIRSF009393 | |
| SUPFAM | SSF53383 SSF55904 | |
| PROSITE | PS00703 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008923 |
lysine decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006554 |
lysine catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0097216 |
guanosine tetraphosphate binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008923 |
lysine decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008923 |
lysine decarboxylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000310 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006520 |
cellular amino acid metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016831 |
carboxy-lyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008923 |
lysine decarboxylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016831 |
carboxy-lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Kanjee, U et al. (2011) Linkage between the bacterial acid stress and stringent responses: the structure of the inducible lysine decarboxylase. EMBO J. 30 931-44 PubMed GONUTS page
- ↑ El Bakkouri, M et al. (2010) Structure of RavA MoxR AAA+ protein reveals the design principles of a molecular cage modulating the inducible lysine decarboxylase activity. Proc. Natl. Acad. Sci. U.S.A. 107 22499-504 PubMed GONUTS page
- ↑ 3.0 3.1 Snider, J et al. (2006) Formation of a distinctive complex between the inducible bacterial lysine decarboxylase and a novel AAA+ ATPase. J. Biol. Chem. 281 1532-46 PubMed GONUTS page
- ↑ 4.0 4.1 Kikuchi, Y et al. (1997) Characterization of a second lysine decarboxylase isolated from Escherichia coli. J. Bacteriol. 179 4486-92 PubMed GONUTS page
- ↑ Goldemberg, SH (1980) Lysine decarboxylase mutants of Escherichia coli: evidence for two enzyme forms. J. Bacteriol. 141 1428-31 PubMed GONUTS page
