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ECOLI:HYFB

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Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) hyfB (synonyms: yffF)
Protein Name(s) Hydrogenase-4 component B
External Links
UniProt P23482
EMBL M63654
U00096
AP009048
PIR A65024
RefSeq NP_416977.1
YP_490710.1
ProteinModelPortal P23482
SMR P23482
DIP DIP-9984N
IntAct P23482
MINT MINT-1254904
STRING 511145.b2482
TCDB 3.D.1.9.1
EnsemblBacteria AAC75535
BAA16360
GeneID 12930202
946961
KEGG ecj:Y75_p2435
eco:b2482
PATRIC 32120351
EchoBASE EB1259
EcoGene EG11282
eggNOG COG0651
HOGENOM HOG000278686
InParanoid P23482
KO K12137
OMA AAMCFVK
OrthoDB EOG6CCH3Q
PhylomeDB P23482
BioCyc EcoCyc:MONOMER0-153
ECOL316407:JW2467-MONOMER
PRO PR:P23482
Proteomes UP000000318
UP000000625
Genevestigator P23482
GO GO:0016021
GO:0005886
GO:0008137
GO:0042773
InterPro IPR001750
IPR003918
Pfam PF00361
PRINTS PR01437

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005886

plasma membrane

PMID:15919996[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0008137

NADH dehydrogenase (ubiquinone) activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003918

F

Seeded From UniProt

complete

involved_in

GO:0042773

ATP synthesis coupled electron transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003918

P

Seeded From UniProt

complete

GO:0016021

integral to membrane

PMID:9387241[2]

ECO:0000247


UniProtKB:P0AFE8


C

Table 3. Predicted membrane-spanning a-helices

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003918

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

GO:0005887

integral to plasma membrane

PMID:9387241[2]

ECO:0000250

UniProtKB:P0AFE8


C

Table 2: Sequence similarity inferred from a direct assay.

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-KW:KW-0997
UniProtKB-SubCell:SL-0037

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed GONUTS page
  2. 2.0 2.1 Andrews, SC et al. (1997) A 12-cistron Escherichia coli operon (hyf) encoding a putative proton-translocating formate hydrogenlyase system. Microbiology (Reading, Engl.) 143 ( Pt 11) 3633-47 PubMed GONUTS page