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ECOLI:HELD
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | helD | |
| Protein Name(s) | Helicase IV
75 kDa helicase | |
| External Links | ||
| UniProt | P15038 | |
| EMBL | J04726 U00096 AP009048 | |
| PIR | A64837 | |
| RefSeq | NP_415482.1 YP_489234.1 | |
| ProteinModelPortal | P15038 | |
| SMR | P15038 | |
| DIP | DIP-9876N | |
| IntAct | P15038 | |
| MINT | MINT-1226516 | |
| STRING | 511145.b0962 | |
| BindingDB | P15038 | |
| ChEMBL | CHEMBL4405 | |
| PaxDb | P15038 | |
| PRIDE | P15038 | |
| EnsemblBacteria | AAC74048 BAA35727 | |
| GeneID | 12934368 946227 | |
| KEGG | ecj:Y75_p0934 eco:b0962 | |
| PATRIC | 32117143 | |
| EchoBASE | EB0421 | |
| EcoGene | EG10426 | |
| eggNOG | COG0210 | |
| HOGENOM | HOG000118816 | |
| InParanoid | P15038 | |
| KO | K03658 | |
| OMA | HYFGEGD | |
| OrthoDB | EOG6HJ254 | |
| PhylomeDB | P15038 | |
| BioCyc | EcoCyc:EG10426-MONOMER ECOL316407:JW0945-MONOMER | |
| PRO | PR:P15038 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P15038 | |
| GO | GO:0033202 GO:0016020 GO:0005524 GO:0043140 GO:0003677 GO:0000155 GO:0032508 GO:0006310 | |
| Gene3D | 3.40.50.300 | |
| InterPro | IPR014017 IPR000212 IPR003661 IPR022161 IPR027417 IPR014016 | |
| PANTHER | PTHR11070 | |
| Pfam | PF12462 PF00580 PF13361 | |
| SMART | SM00388 | |
| SUPFAM | SSF52540 | |
| PROSITE | PS51198 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0043140 |
ATP-dependent 3'-5' DNA helicase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10426 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11064 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10426 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000725 |
recombinational repair |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000116141 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043140 |
ATP-dependent 3'-5' DNA helicase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0033202 |
DNA helicase complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004003 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0043140 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0043140 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004003 |
ATP-dependent DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000212 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 Wood, ER & Matson, SW (1987) Purification and characterization of a new DNA-dependent ATPase with helicase activity from Escherichia coli. J. Biol. Chem. 262 15269-76 PubMed GONUTS page
- ↑ Mendonca, VM et al. (1993) Double helicase II (uvrD)-helicase IV (helD) deletion mutants are defective in the recombination pathways of Escherichia coli. J. Bacteriol. 175 4641-51 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
