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ECOLI:GLGB
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | glgB | |
| Protein Name(s) | 1,4-alpha-glucan branching enzyme GlgB
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase Alpha-(1->4)-glucan branching enzyme Glycogen branching enzyme BE | |
| External Links | ||
| UniProt | P07762 | |
| EMBL | M13751 U18997 U00096 AP009048 | |
| PIR | A25498 | |
| RefSeq | NP_417890.1 YP_492001.1 | |
| PDB | 1GTY 1M7X 3O7Y 3O7Z | |
| PDBsum | 1GTY 1M7X 3O7Y 3O7Z | |
| ProteinModelPortal | P07762 | |
| SMR | P07762 | |
| IntAct | P07762 | |
| STRING | 511145.b3432 | |
| CAZy | CBM48 GH13 | |
| PaxDb | P07762 | |
| PRIDE | P07762 | |
| EnsemblBacteria | AAC76457 BAE77860 | |
| GeneID | 12933509 947940 | |
| KEGG | ecj:Y75_p3745 eco:b3432 | |
| PATRIC | 32122304 | |
| EchoBASE | EB0373 | |
| EcoGene | EG10378 | |
| eggNOG | COG0296 | |
| HOGENOM | HOG000283037 | |
| InParanoid | P07762 | |
| KO | K00700 | |
| OMA | DATEVWV | |
| OrthoDB | EOG6JX7GT | |
| PhylomeDB | P07762 | |
| BioCyc | EcoCyc:GLYCOGEN-BRANCH-MONOMER ECOL316407:JW3395-MONOMER MetaCyc:GLYCOGEN-BRANCH-MONOMER | |
| UniPathway | UPA00164 | |
| EvolutionaryTrace | P07762 | |
| PRO | PR:P07762 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P07762 | |
| GO | GO:0003844 GO:0043169 GO:0004553 GO:0006974 GO:0005978 | |
| Gene3D | 2.60.40.10 2.60.40.1180 3.20.20.80 | |
| HAMAP | MF_00685 | |
| InterPro | IPR006048 IPR006407 IPR015902 IPR013780 IPR006047 IPR004193 IPR013781 IPR017853 IPR013783 IPR014756 | |
| PANTHER | PTHR10357 | |
| Pfam | PF00128 PF02806 PF02922 | |
| PIRSF | PIRSF000463 | |
| SUPFAM | SSF51445 SSF81296 | |
| TIGRFAMs | TIGR01515 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0003844 |
1,4-alpha-glucan branching enzyme activity |
ECO:0000315 |
F |
Table 5 shows sequence point mutations, deletions or truncations that result in glycogen storage disease type IV, caused by lethal or retarded function of glycogen branching enzyme. |
complete | |||||
| GO:0004373 |
glycogen (starch) synthase activity |
ECO:0000266 |
|
F |
Table 2 presents the partial alignment of conserved residues between Escherichia coli glycogen synthase and other bacterial glycogen syntheses and plant starch syntheses. |
complete | ||||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10378 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000040010 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10378 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003844 |
1,4-alpha-glucan branching enzyme activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10378 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003844 |
1,4-alpha-glucan branching enzyme activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003844 |
1,4-alpha-glucan branching enzyme activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043169 |
cation binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003844 |
1,4-alpha-glucan branching enzyme activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0102752 |
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003844 |
1,4-alpha-glucan branching enzyme activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098355 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098355 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0320 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016757 |
transferase activity, transferring glycosyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005977 |
glycogen metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Abad, MC et al. (2002) The X-ray crystallographic structure of Escherichia coli branching enzyme. J. Biol. Chem. 277 42164-70 PubMed GONUTS page
- ↑ Sheng, F et al. (2009) The crystal structures of the open and catalytically competent closed conformation of Escherichia coli glycogen synthase. J. Biol. Chem. 284 17796-807 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Khil, PP & Camerini-Otero, RD (2002) Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. 44 89-105 PubMed GONUTS page
- ↑ Eydallin, G et al. (2007) Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12. FEBS Lett. 581 2947-53 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
- ↑ Binderup, K & Preiss, J (1998) Glutamate-459 is important for Escherichia coli branching enzyme activity. Biochemistry 37 9033-7 PubMed GONUTS page
