GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:GLGA
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | glgA | |
| Protein Name(s) | Glycogen synthase
Starch [bacterial glycogen] synthase | |
| External Links | ||
| UniProt | P0A6U8 | |
| EMBL | V00281 J02616 U18997 U00096 AP009048 J01616 | |
| PIR | H65138 | |
| RefSeq | NP_417887.1 YP_492004.1 | |
| PDB | 2QZS 2R4T 2R4U 3COP 3CX4 3D1J 3GUH | |
| PDBsum | 2QZS 2R4T 2R4U 3COP 3CX4 3D1J 3GUH | |
| ProteinModelPortal | P0A6U8 | |
| SMR | P0A6U8 | |
| IntAct | P0A6U8 | |
| STRING | 511145.b3429 | |
| PaxDb | P0A6U8 | |
| PRIDE | P0A6U8 | |
| EnsemblBacteria | AAC76454 BAE77863 | |
| GeneID | 12933507 947932 | |
| KEGG | ecj:Y75_p3748 eco:b3429 | |
| PATRIC | 32122298 | |
| EchoBASE | EB0372 | |
| EcoGene | EG10377 | |
| eggNOG | COG0297 | |
| HOGENOM | HOG000294941 | |
| InParanoid | P0A6U8 | |
| KO | K00703 | |
| OMA | PFWRPDI | |
| OrthoDB | EOG6JTC6Z | |
| PhylomeDB | P0A6U8 | |
| BioCyc | EcoCyc:GLYCOGENSYN-MONOMER ECOL316407:JW3392-MONOMER MetaCyc:GLYCOGENSYN-MONOMER | |
| UniPathway | UPA00164 | |
| EvolutionaryTrace | P0A6U8 | |
| PRO | PR:P0A6U8 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0A6U8 | |
| GO | GO:0009011 GO:0006974 GO:0005978 | |
| HAMAP | MF_00484 | |
| InterPro | IPR001296 IPR011835 IPR013534 | |
| Pfam | PF08323 PF00534 | |
| TIGRFAMs | TIGR02095 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0004373 |
glycogen (starch) synthase activity |
ECO:0000247 |
F |
"The region between glgB and glgC contains an open reading frame (ORF) of 1521 bp which we call glgX. This ORF is capable of coding for an Mr 56 684 protein. The deduced amino acid (aa) sequence for the putative product shows significant similarity to the E. coli glycogen branching enzyme, and to several different glucan hydrolases and transferases" |
Missing: with/from | |||||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10377 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10377 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009011 |
starch synthase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004373 |
glycogen (starch) synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009011 |
starch synthase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0033201 |
alpha-1,4-glucan synthase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000103155 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0009011 |
starch synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000103155 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0005978 |
glycogen biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0320 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016757 |
transferase activity, transferring glycosyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Romeo, T et al. (1988) Analysis of the Escherichia coli glycogen gene cluster suggests that catabolic enzymes are encoded among the biosynthetic genes. Gene 70 363-76 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Khil, PP & Camerini-Otero, RD (2002) Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. 44 89-105 PubMed GONUTS page
- ↑ Furukawa, K et al. (1993) Role of the conserved Lys-X-Gly-Gly sequence at the ADP-glucose-binding site in Escherichia coli glycogen synthase. J. Biol. Chem. 268 23837-42 PubMed GONUTS page
- ↑ Morán-Zorzano, MT et al. (2007) Occurrence of more than one important source of ADPglucose linked to glycogen biosynthesis in Escherichia coli and Salmonella. FEBS Lett. 581 4423-9 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
