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ECOLI:DCUP
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | hemE (ECO:0000255 with HAMAP-Rule:MF_00218) | |
Protein Name(s) | Uroporphyrinogen decarboxylase (ECO:0000255 with HAMAP-Rule:MF_00218)
UPD (ECO:0000255 with HAMAP-Rule:MF_00218) URO-D (ECO:0000255 with HAMAP-Rule:MF_00218) | |
External Links | ||
UniProt | P29680 | |
EMBL | D12624 U00006 U00096 AP009048 | |
PIR | H65206 | |
RefSeq | NP_418425.1 YP_491463.1 | |
ProteinModelPortal | P29680 | |
SMR | P29680 | |
IntAct | P29680 | |
STRING | 511145.b3997 | |
PaxDb | P29680 | |
PRIDE | P29680 | |
EnsemblBacteria | AAC76971 BAE77322 | |
GeneID | 12934224 948497 | |
KEGG | ecj:Y75_p3199 eco:b3997 | |
PATRIC | 32123517 | |
EchoBASE | EB1505 | |
EcoGene | EG11543 | |
eggNOG | COG0407 | |
HOGENOM | HOG000253896 | |
InParanoid | P29680 | |
KO | K01599 | |
OMA | FIDACFR | |
OrthoDB | EOG6VXF6H | |
PhylomeDB | P29680 | |
BioCyc | EcoCyc:UROGENDECARBOX-MONOMER ECOL316407:JW3961-MONOMER MetaCyc:UROGENDECARBOX-MONOMER | |
UniPathway | UPA00251 | |
PRO | PR:P29680 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P29680 | |
GO | GO:0005737 GO:0004853 GO:0006783 GO:0006779 GO:0019353 GO:0006780 | |
HAMAP | MF_00218 | |
InterPro | IPR006361 IPR000257 | |
Pfam | PF01208 | |
TIGRFAMs | TIGR01464 | |
PROSITE | PS00906 PS00907 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0019353 |
protoporphyrinogen IX biosynthetic process from glutamate |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11543 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006783 |
heme biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11543 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11543 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11543 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006783 |
heme biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006780 |
uroporphyrinogen III biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006779 |
porphyrin-containing compound biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019353 |
protoporphyrinogen IX biosynthetic process from glutamate |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006779 |
porphyrin-containing compound biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004853 |
uroporphyrinogen decarboxylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000081074 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000081074 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006779 |
porphyrin-containing compound biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000081074 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0016831 |
carboxy-lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006779 |
porphyrin-containing compound biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006782 |
protoporphyrinogen IX biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00251 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Săsărman, A et al. (1975) Uroporphyrin-accumulating mutant of Escherichia coli K-12. J. Bacteriol. 124 1205-12 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
- ↑ Lopez-Campistrous, A et al. (2005) Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth. Mol. Cell Proteomics 4 1205-9 PubMed GONUTS page
- ↑ Pido, S et al. (1994) Characterization of a hemA/hemE mutant of E. coli and regulation of hemE. Cell. Mol. Biol. (Noisy-le-grand) 40 945-56 PubMed GONUTS page