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ECOLI:CYDD

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Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) cydD (synonyms: htrD)
Protein Name(s) ATP-binding/permease protein CydD
External Links
UniProt P29018
EMBL L21749
U00096
AP009048
L25859
M95935
PIR F64827
RefSeq NP_415407.1
YP_489159.1
ProteinModelPortal P29018
SMR P29018
DIP DIP-9363N
IntAct P29018
STRING 511145.b0887
TCDB 3.A.1.129.1
PaxDb P29018
EnsemblBacteria AAC73973
BAA35612
GeneID 12932720
949052
KEGG ecj:Y75_p0859
eco:b0887
PATRIC 32116983
EchoBASE EB1377
EcoGene EG11405
eggNOG COG4988
InParanoid P29018
KO K16013
OMA LGFLPYQ
OrthoDB EOG6T7N3V
PhylomeDB P29018
BioCyc EcoCyc:CYDD-MONOMER
ECOL316407:JW0870-MONOMER
MetaCyc:CYDD-MONOMER
PRO PR:P29018
Proteomes UP000000318
UP000000625
Genevestigator P29018
GO GO:0016021
GO:0016020
GO:0005886
GO:0005524
GO:0042626
GO:0034040
GO:0033228
GO:0034775
GO:0006869
Gene3D 3.40.50.300
InterPro IPR003593
IPR011527
IPR003439
IPR017871
IPR014216
IPR027417
Pfam PF00664
PF00005
SMART SM00382
SUPFAM SSF52540
SSF90123
TIGRFAMs TIGR02857
PROSITE PS50929
PS00211
PS50893

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0042626

ATPase activity, coupled to transmembrane movement of substances

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10613
EcoGene:EG11405
FB:FBgn0004513
MGI:MGI:97570
MGI:MGI:98483
PANTHER:PTN002517083
PomBase:SPBC25B2.02c
PomBase:SPCC737.09c
SGD:S000004916
TAIR:locus:2041434
UniProtKB:A0A1D8PKI5
UniProtKB:P21439
UniProtKB:Q03519
UniProtKB:Q9NP58
UniProtKB:Q9NP78
ZFIN:ZDB-GENE-080204-52

F

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10613
EcoGene:EG11405
FB:FBgn0004513
MGI:MGI:1924956
PANTHER:PTN002517083
PomBase:SPCC737.09c
RGD:3817
RGD:3818
UniProtKB:Q03518
UniProtKB:Q03519
UniProtKB:Q2M3G0
UniProtKB:Q8IDT6
UniProtKB:Q9NP58
UniProtKB:Q9NP78
UniProtKB:Q9NRK6
WB:WBGene00001815

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11405
EcoGene:EG11622
EcoGene:EG14374
PANTHER:PTN000657675
UniProtKB:O06138
UniProtKB:O53645

C

Seeded From UniProt

complete

involved_in

GO:0045454

cell redox homeostasis

PMID:8892838[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045454

cell redox homeostasis

PMID:12393891[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0043190

ATP-binding cassette (ABC) transporter complex

PMID:7934832[4]

ECO:0000255

match to sequence model evidence used in manual assertion

C

Seeded From UniProt

Missing: with/from

enables

GO:0042626

ATPase activity, coupled to transmembrane movement of substances

PMID:16040611[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042626

ATPase activity, coupled to transmembrane movement of substances

PMID:12393891[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0034775

glutathione transmembrane transport

PMID:16040611[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0033228

cysteine export across plasma membrane

PMID:12393891[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0016887

ATPase activity

PMID:24958725[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:12393891[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:15470119[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:17309111[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:15919996[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003439
InterPro:IPR011527
InterPro:IPR014216
InterPro:IPR017871
InterPro:IPR036640

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014216

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011527
InterPro:IPR036640

C

Seeded From UniProt

complete

enables

GO:0016887

ATPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003439
InterPro:IPR017871

F

Seeded From UniProt

complete

enables

GO:0042626

ATPase activity, coupled to transmembrane movement of substances

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011527

F

Seeded From UniProt

complete

involved_in

GO:0042883

cysteine transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014216

P

Seeded From UniProt

complete

involved_in

GO:0055085

transmembrane transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011527

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-KW:KW-0997
UniProtKB-SubCell:SL-0037

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. ↑ Goldman, BS et al. (1996) Use of heme reporters for studies of cytochrome biosynthesis and heme transport. J. Bacteriol. 178 6338-47 PubMed GONUTS page
  3. ↑ 3.0 3.1 3.2 3.3 Pittman, MS et al. (2002) Cysteine is exported from the Escherichia coli cytoplasm by CydDC, an ATP-binding cassette-type transporter required for cytochrome assembly. J. Biol. Chem. 277 49841-9 PubMed GONUTS page
  4. ↑ Poole, RK et al. (1993) Cytochrome bd biosynthesis in Escherichia coli: the sequences of the cydC and cydD genes suggest that they encode the components of an ABC membrane transporter. Mol. Microbiol. 10 421-30 PubMed GONUTS page
  5. ↑ 5.0 5.1 Pittman, MS et al. (2005) A bacterial glutathione transporter (Escherichia coli CydDC) exports reductant to the periplasm. J. Biol. Chem. 280 32254-61 PubMed GONUTS page
  6. ↑ Yamashita, M et al. (2014) Structure and function of the bacterial heterodimeric ABC transporter CydDC: stimulation of ATPase activity by thiol and heme compounds. J. Biol. Chem. 289 23177-88 PubMed GONUTS page
  7. ↑ Cruz-Ramos, H et al. (2004) Membrane topology and mutational analysis of Escherichia coli CydDC, an ABC-type cysteine exporter required for cytochrome assembly. Microbiology (Reading, Engl.) 150 3415-27 PubMed GONUTS page
  8. ↑ Zhang, N et al. (2007) Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics 7 484-93 PubMed GONUTS page
  9. ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed GONUTS page
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