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ECOLI:CSPA
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | cspA (synonyms: cspS) | |
| Protein Name(s) | Cold shock protein CspA
CSP-A 7.4 kDa cold shock protein CS7.4 | |
| External Links | ||
| UniProt | P0A9X9 | |
| EMBL | M30139 U00039 U00096 AP009048 U60035 | |
| PIR | JH0201 | |
| RefSeq | NP_418012.1 YP_491880.1 | |
| PDB | 1MJC 2BH8 3MEF | |
| PDBsum | 1MJC 2BH8 3MEF | |
| ProteinModelPortal | P0A9X9 | |
| SMR | P0A9X9 | |
| DIP | DIP-31862N | |
| IntAct | P0A9X9 | |
| MINT | MINT-1220153 | |
| STRING | 511145.b3556 | |
| PaxDb | P0A9X9 | |
| PRIDE | P0A9X9 | |
| EnsemblBacteria | AAC76580 BAE77739 | |
| GeneID | 12933539 948070 | |
| KEGG | ecj:Y75_p3621 eco:b3556 | |
| PATRIC | 32122584 | |
| EchoBASE | EB0164 | |
| EcoGene | EG10166 | |
| eggNOG | COG1278 | |
| HOGENOM | HOG000070674 | |
| InParanoid | P0A9X9 | |
| KO | K03704 | |
| OMA | SVTFDVQ | |
| OrthoDB | EOG618R0J | |
| PhylomeDB | P0A9X9 | |
| BioCyc | EcoCyc:PD03695 ECOL316407:JW3525-MONOMER | |
| EvolutionaryTrace | P0A9X9 | |
| PRO | PR:P0A9X9 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0A9X9 | |
| GO | GO:0005737 GO:0003677 GO:0003723 GO:0001072 GO:0003697 GO:0003727 GO:0060567 GO:0009409 GO:0031564 GO:0006351 | |
| Gene3D | 2.40.50.140 | |
| InterPro | IPR019844 IPR012156 IPR011129 IPR002059 IPR012340 | |
| Pfam | PF00313 | |
| PIRSF | PIRSF002599 | |
| PRINTS | PR00050 | |
| SMART | SM00357 | |
| SUPFAM | SSF50249 | |
| PROSITE | PS00352 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0060567 |
negative regulation of DNA-templated transcription, termination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009409 |
response to cold |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003727 |
single-stranded RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001072 |
transcription antitermination factor activity, RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006351 |
transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006351 |
transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006351 |
transcription, DNA-templated |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031564 |
transcription antitermination |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0001072 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006351 |
transcription, DNA-templated |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Bae, W et al. (2000) Escherichia coli CspA-family RNA chaperones are transcription antiterminators. Proc. Natl. Acad. Sci. U.S.A. 97 7784-9 PubMed GONUTS page
- ↑ 2.0 2.1 Jones, PG et al. (1987) Induction of proteins in response to low temperature in Escherichia coli. J. Bacteriol. 169 2092-5 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Jiang, W et al. (1997) CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone. J. Biol. Chem. 272 196-202 PubMed GONUTS page
- ↑ 4.0 4.1 Brandi, A et al. (1994) Interaction of the main cold shock protein CS7.4 (CspA) of Escherichia coli with the promoter region of hns. Biochimie 76 1090-8 PubMed GONUTS page
- ↑ La Teana, A et al. (1991) Identification of a cold shock transcriptional enhancer of the Escherichia coli gene encoding nucleoid protein H-NS. Proc. Natl. Acad. Sci. U.S.A. 88 10907-11 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
