GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECOLI:BTUB

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) btuB (synonyms: bfe, cer, dcrC)
Protein Name(s) Vitamin B12 transporter BtuB

Cobalamin receptor Outer membrane cobalamin translocator

External Links
UniProt P06129
EMBL M10112
U00006
U00096
AP009048
M57568
L14556
PIR A65204
RefSeq NP_418401.1
YP_491486.1
PDB 1NQE
1NQF
1NQG
1NQH
1UJW
2GSK
2GUF
2YSU
3M8B
3M8D
3RGM
3RGN
PDBsum 1NQE
1NQF
1NQG
1NQH
1UJW
2GSK
2GUF
2YSU
3M8B
3M8D
3RGM
3RGN
ProteinModelPortal P06129
SMR P06129
DIP DIP-9232N
IntAct P06129
STRING 511145.b3966
TCDB 1.B.14.3.1
PRIDE P06129
EnsemblBacteria AAC76948
BAE77345
GeneID 12930530
948468
KEGG ecj:Y75_p3222
eco:b3966
PATRIC 32123453
EchoBASE EB0124
EcoGene EG10126
eggNOG COG4206
HOGENOM HOG000269547
InParanoid P06129
KO K16092
OMA RNQIQAN
OrthoDB EOG68H83J
PhylomeDB P06129
BioCyc EcoCyc:EG10126-MONOMER
ECOL316407:JW3938-MONOMER
MetaCyc:EG10126-MONOMER
EvolutionaryTrace P06129
PRO PR:P06129
Proteomes UP000000318
UP000000625
Genevestigator P06129
GO GO:0009279
GO:0046930
GO:0015235
GO:0046872
GO:0015288
GO:0004872
GO:0015889
GO:0006811
Gene3D 2.170.130.10
2.40.170.20
HAMAP MF_01531
InterPro IPR010101
IPR012910
IPR000531
IPR010916
IPR010917
Pfam PF07715
PF00593
TIGRFAMs TIGR01779
PROSITE PS00430
PS01156

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009279

cell outer membrane

PMID:10806384[1]

ECO:0000314

C

Table 1

complete

involved_in

GO:0034220

ion transmembrane transport

PMID:15465872[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0005216

ion channel activity

PMID:15465872[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

PMID:15465872[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0019904

protein domain specific binding

PMID:15644214[3]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P02929

F

Seeded From UniProt

complete

enables

GO:0042931

enterobactin transmembrane transporter activity

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001247782
UniProtKB:Q05098
UniProtKB:Q9I527

F

Seeded From UniProt

complete

involved_in

GO:0042930

enterobactin transport

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10293
PANTHER:PTN001247782
UniProtKB:Q05098
UniProtKB:Q9I527

P

Seeded From UniProt

complete

involved_in

GO:0033214

siderophore-dependent iron import into cell

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10293
PANTHER:PTN002824128

P

Seeded From UniProt

complete

part_of

GO:0031230

intrinsic component of cell outer membrane

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10293
PANTHER:PTN002824128
UniProtKB:P37409

C

Seeded From UniProt

complete

involved_in

GO:0015685

ferric-enterobactin import into cell

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10293
PANTHER:PTN001247782

P

Seeded From UniProt

complete

enables

GO:0015344

siderophore uptake transmembrane transporter activity

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002824128
UniProtKB:Q05098
UniProtKB:Q9I527

F

Seeded From UniProt

complete

involved_in

GO:0015889

cobalamin transport

PMID:11790740[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035461

vitamin transmembrane transport

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0090482

P

Seeded From UniProt

complete

involved_in

GO:0044718

siderophore transmembrane transport

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0015344

P

Seeded From UniProt

complete

enables

GO:0015420

cobalamin-transporting ATPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010101

F

Seeded From UniProt

complete

involved_in

GO:0015889

cobalamin transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010101

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010101

C

Seeded From UniProt

complete

involved_in

GO:0015889

cobalamin transport

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000079051

P

Seeded From UniProt

complete

enables

GO:0090482

vitamin transmembrane transporter activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000079051

F

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000079051

C

Seeded From UniProt

complete

enables

GO:0015288

porin activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0626

F

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0998
UniProtKB-SubCell:SL-0040

C

Seeded From UniProt

complete

part_of

GO:0046930

pore complex

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0626

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0006811

ion transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0406

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Molloy, MP et al. (2000) Proteomic analysis of the Escherichia coli outer membrane. Eur. J. Biochem. 267 2871-81 PubMed GONUTS page
  2. 2.0 2.1 2.2 Zakharov, SD et al. (2004) Colicin occlusion of OmpF and TolC channels: outer membrane translocons for colicin import. Biophys. J. 87 3901-11 PubMed GONUTS page
  3. Sean Peacock, R et al. (2005) The solution structure of the C-terminal domain of TonB and interaction studies with TonB box peptides. J. Mol. Biol. 345 1185-97 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 4.4 4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  5. Cadieux, N et al. (2002) Identification of the periplasmic cobalamin-binding protein BtuF of Escherichia coli. J. Bacteriol. 184 706-17 PubMed GONUTS page