ECOLI:BASR

Species (Taxon ID)	Escherichia coli (strain K12). (83333)
Gene Name(s)	basR (synonyms: pmrA)
Protein Name(s)	Transcriptional regulatory protein BasR
External Links
UniProt	P30843
EMBL	D14055 AY725270 AY725271 AY725272 AY725273 AY725274 AY725275 AY725276 AY725277 AY725278 AY725279 AY725280 AY725281 AY725282 AY725283 AY725284 AY725285 AY725286 AY725287 AY725288 AY725289 AY725290 AY725291 AY725292 AY725293 AY725294 AY725295 AY725296 AY725297 AY725298 AY725299 AY725300 AY725301 AY725302 AY725303 AY725304 AY725305 AY725306 AY725307 AY725308 AY725309 AY725310 AY725311 AY725312 AY725313 AY725314 AY725315 AY725316 AY725317 AY725318 AY725319 AY725320 AY725321 AY725322 AY725323 AY725324 AY725325 AY725326 AY725327 AY725328 AY725329 AY725330 AY725331 AY725332 AY725333 U14003 U00096 AP009048
PIR	H65220
RefSeq	NP_418537.1 YP_492256.1
ProteinModelPortal	P30843
SMR	P30843
DIP	DIP-9201N
IntAct	P30843
STRING	511145.b4113
PaxDb	P30843
PRIDE	P30843
EnsemblBacteria	AAC77074 BAE78115
GeneID	12934089 948631
KEGG	ecj:Y75_p4000 eco:b4113
PATRIC	32123791
EchoBASE	EB1572
EcoGene	EG11615
eggNOG	COG0745
InParanoid	P30843
KO	K07771
OMA	ERIWGYE
OrthoDB	EOG6G4VQG
PhylomeDB	P30843
BioCyc	EcoCyc:BASR-MONOMER ECOL316407:JW4074-MONOMER RETL1328306-WGS:GSTH-5535-MONOMER
PRO	PR:P30843
Proteomes	UP000000318 UP000000625
Genevestigator	P30843
GO	GO:0005737 GO:0003677 GO:0000156 GO:0000160 GO:0006355 GO:0046677 GO:0010041 GO:0006351
Gene3D	1.10.10.10
InterPro	IPR011006 IPR001867 IPR016032 IPR001789 IPR011991
Pfam	PF00072 PF00486
SMART	SM00448 SM00862
SUPFAM	SSF46894 SSF52172
PROSITE	PS50110

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
part_of	GO:0005829	cytosol	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10020 EcoGene:EG10061 EcoGene:EG10731 EcoGene:EG11618 PANTHER:PTN000724188 UniProtKB:P9WGM1	C	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10020 EcoGene:EG10061 EcoGene:EG14045 PANTHER:PTN000724188	F	Seeded From UniProt	complete
enables	GO:0000156	phosphorelay response regulator activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10061 EcoGene:EG10672 EcoGene:EG11615 EcoGene:EG12615 PANTHER:PTN000724188 UniProtKB:O07776 UniProtKB:P37478 UniProtKB:Q9I2U3	F	Seeded From UniProt	complete
involved_in	GO:0010041	response to iron(III) ion	PMID:12139617^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010041	response to iron(III) ion	PMID:15322361^[3]	ECO:0000270	expression pattern evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	PMID:16428424^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0000160	phosphorelay signal transduction system	PMID:15522865^[5]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0000156	phosphorelay response regulator activity	PMID:15522865^[5]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0000160	phosphorelay signal transduction system	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001789 InterPro:IPR001867	P	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001867 InterPro:IPR016032	F	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001867 InterPro:IPR016032	P	Seeded From UniProt	complete
involved_in	GO:0000160	phosphorelay signal transduction system	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0902	P	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
involved_in	GO:0046677	response to antibiotic	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0046	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ Chamnongpol, S et al. (2002) Fe(III)-mediated cellular toxicity. Mol. Microbiol. 45 711-9 PubMed GONUTS page
↑ Hagiwara, D et al. (2004) A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses. Biosci. Biotechnol. Biochem. 68 1758-67 PubMed GONUTS page
↑ Froelich, JM et al. (2006) A pmrA constitutive mutant sensitizes Escherichia coli to deoxycholic acid. J. Bacteriol. 188 1180-3 PubMed GONUTS page
↑ ^5.0 ^5.1 Yamamoto, K et al. (2005) Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli. J. Biol. Chem. 280 1448-56 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:12139617-2] Chamnongpol, S et al. (2002) Fe(III)-mediated cellular toxicity. Mol. Microbiol. 45 711-9 PubMed GONUTS page

[PMID:15322361-3] Hagiwara, D et al. (2004) A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses. Biosci. Biotechnol. Biochem. 68 1758-67 PubMed GONUTS page

[PMID:16428424-4] Froelich, JM et al. (2006) A pmrA constitutive mutant sensitizes Escherichia coli to deoxycholic acid. J. Bacteriol. 188 1180-3 PubMed GONUTS page

[PMID:15522865-5] 5.0 ^5.1 Yamamoto, K et al. (2005) Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli. J. Biol. Chem. 280 1448-56 PubMed GONUTS page

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ECOLI:BASR

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