ECOLI:ASTC

Species (Taxon ID)	Escherichia coli (strain K12). (83333)
Gene Name(s)	astC (synonyms: argM, cstC, ydjW)
Protein Name(s)	Succinylornithine transaminase SOAT Carbon starvation protein C Succinylornithine aminotransferase
External Links
UniProt	P77581
EMBL	U90416 U00096 AP009048
PIR	D64934
RefSeq	NP_416262.1 YP_490009.1
PDB	4ADB 4ADC 4ADD 4ADE
PDBsum	4ADB 4ADC 4ADD 4ADE
ProteinModelPortal	P77581
SMR	P77581
DIP	DIP-9145N
IntAct	P77581
STRING	511145.b1748
PaxDb	P77581
PRIDE	P77581
EnsemblBacteria	AAC74818 BAA15539
GeneID	12934011 946255
KEGG	ecj:Y75_p1723 eco:b1748
PATRIC	32118805
EchoBASE	EB3755
EcoGene	EG13999
eggNOG	COG4992
HOGENOM	HOG000020206
InParanoid	P77581
KO	K00840
OMA	MPEGFIN
OrthoDB	EOG6QVRHN
PhylomeDB	P77581
BioCyc	EcoCyc:SUCCORNTRANSAM-MONOMER ECOL316407:JW1737-MONOMER MetaCyc:SUCCORNTRANSAM-MONOMER
UniPathway	UPA00185
PRO	PR:P77581
Proteomes	UP000000318 UP000000625
Genevestigator	P77581
GO	GO:0030170 GO:0043825 GO:0006527 GO:0019544 GO:0019545 GO:0006593
Gene3D	3.40.640.10 3.90.1150.10
HAMAP	MF_01107 MF_01173
InterPro	IPR017652 IPR004636 IPR005814 IPR015424 IPR015421 IPR015422 IPR026330
PANTHER	PTHR11986
Pfam	PF00202
PIRSF	PIRSF000521
SUPFAM	SSF53383
TIGRFAMs	TIGR03246 TIGR00707
PROSITE	PS00600

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
enables	GO:0030170	pyridoxal phosphate binding	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG12718 PANTHER:PTN000241033	F	Seeded From UniProt	complete
involved_in	GO:0006527	arginine catabolic process	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG13999 PANTHER:PTN001736444	P	Seeded From UniProt	complete
enables	GO:0043825	succinylornithine transaminase activity	PMID:9696779^[2]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0006593	ornithine catabolic process	PMID:9696779^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006527	arginine catabolic process	PMID:9696779^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0042450	arginine biosynthetic process via ornithine	PMID:25243376^[3]	ECO:0000316	genetic interaction evidence used in manual assertion	UniProtKB:P18335 UniProtKB:P22256	P	Seeded From UniProt	complete
involved_in	GO:0019545	arginine catabolic process to succinate	PMID:9696780^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0019545	arginine catabolic process to succinate	PMID:9696779^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006593	ornithine catabolic process	PMID:9696780^[4]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0003992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	PMID:25243376^[3]	ECO:0000314	direct assay evidence used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0003824	catalytic activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR015421 InterPro:IPR015422	F	Seeded From UniProt	complete
involved_in	GO:0006520	cellular amino acid metabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017652	P	Seeded From UniProt	complete
involved_in	GO:0006525	arginine metabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004636	P	Seeded From UniProt	complete
involved_in	GO:0006527	arginine catabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR026330	P	Seeded From UniProt	complete
involved_in	GO:0006593	ornithine catabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR026330	P	Seeded From UniProt	complete
enables	GO:0008483	transaminase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004636 InterPro:IPR005814 InterPro:IPR017652	F	Seeded From UniProt	complete
enables	GO:0030170	pyridoxal phosphate binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR005814 InterPro:IPR017652	F	Seeded From UniProt	complete
enables	GO:0043825	succinylornithine transaminase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR026330	F	Seeded From UniProt	complete
enables	GO:0043825	succinylornithine transaminase activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:2.6.1.81	F	Seeded From UniProt	complete
enables	GO:0008483	transaminase activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000100838	F	Seeded From UniProt	complete
involved_in	GO:0019544	arginine catabolic process to glutamate	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000100838	P	Seeded From UniProt	complete
enables	GO:0030170	pyridoxal phosphate binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000100838	F	Seeded From UniProt	complete
enables	GO:0016740	transferase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0808	F	Seeded From UniProt	complete
enables	GO:0008483	transaminase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0032	F	Seeded From UniProt	complete
involved_in	GO:0006525	arginine metabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0056	P	Seeded From UniProt	complete
involved_in	GO:0019545	arginine catabolic process to succinate	GO_REF:0000041	ECO:0000322	imported manually asserted information used in automatic assertion	UniPathway:UPA00185	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 Schneider, BL et al. (1998) Arginine catabolism and the arginine succinyltransferase pathway in Escherichia coli. J. Bacteriol. 180 4278-86 PubMed GONUTS page
↑ ^3.0 ^3.1 Lal, PB et al. (2014) The redundant aminotransferases in lysine and arginine synthesis and the extent of aminotransferase redundancy in Escherichia coli. Mol. Microbiol. 94 843-56 PubMed GONUTS page
↑ ^4.0 ^4.1 Fraley, CD et al. (1998) The Escherichia coli starvation gene cstC is involved in amino acid catabolism. J. Bacteriol. 180 4287-90 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:9696779-2] 2.0 ^2.1 ^2.2 ^2.3 Schneider, BL et al. (1998) Arginine catabolism and the arginine succinyltransferase pathway in Escherichia coli. J. Bacteriol. 180 4278-86 PubMed GONUTS page

[PMID:25243376-3] 3.0 ^3.1 Lal, PB et al. (2014) The redundant aminotransferases in lysine and arginine synthesis and the extent of aminotransferase redundancy in Escherichia coli. Mol. Microbiol. 94 843-56 PubMed GONUTS page

[PMID:9696780-4] 4.0 ^4.1 Fraley, CD et al. (1998) The Escherichia coli starvation gene cstC is involved in amino acid catabolism. J. Bacteriol. 180 4287-90 PubMed GONUTS page

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ECOLI:ASTC

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