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ECOLI:ARGR

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Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) argR (synonyms: xerA)
Protein Name(s) Arginine repressor
External Links
UniProt P0A6D0
EMBL X13968
M17532
U18997
U00096
AP009048
PIR A33888
RefSeq NP_417704.1
YP_491421.1
PDB 1AOY
1XXA
1XXB
1XXC
PDBsum 1AOY
1XXA
1XXB
1XXC
ProteinModelPortal P0A6D0
SMR P0A6D0
DIP DIP-47999N
IntAct P0A6D0
MINT MINT-1252219
STRING 511145.b3237
PaxDb P0A6D0
EnsemblBacteria AAC76269
BAE77280
GeneID 12930442
947861
KEGG ecj:Y75_p3157
eco:b3237
PATRIC 32121900
EchoBASE EB0068
EcoGene EG10070
eggNOG COG1438
HOGENOM HOG000242730
InParanoid P0A6D0
KO K03402
OMA VKSLFNY
OrthoDB EOG6Z9B6J
PhylomeDB P0A6D0
BioCyc EcoCyc:PD00194
ECOL316407:JW3206-MONOMER
UniPathway UPA00068
EvolutionaryTrace P0A6D0
PRO PR:P0A6D0
Proteomes UP000000318
UP000000625
Genevestigator P0A6D0
GO GO:0005737
GO:0034618
GO:0003700
GO:0044212
GO:0006526
GO:2000143
GO:0042150
GO:0051259
GO:0006351
Gene3D 1.10.10.10
3.30.1360.40
HAMAP MF_00173
InterPro IPR001669
IPR020899
IPR024946
IPR020900
IPR011991
Pfam PF01316
PF02863
PRINTS PR01467
ProDom PD007402
SUPFAM SSF55252
TIGRFAMs TIGR01529

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0042150

plasmid recombination

PMID:3149585[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000144

positive regulation of DNA-templated transcription, initiation

PMID:12003934[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000143

negative regulation of DNA-templated transcription, initiation

PMID:17850814[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1900081

regulation of arginine catabolic process

PMID:12003934[2]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1900079

regulation of arginine biosynthetic process

PMID:4555419[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:8594204[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0034618

arginine binding

PMID:8594204[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0034214

protein hexamerization

PMID:8594204[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0000986

bacterial-type proximal promoter sequence-specific DNA binding

PMID:1640456[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001669
InterPro:IPR020900

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001669
InterPro:IPR020900

P

Seeded From UniProt

complete

involved_in

GO:0006525

arginine metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020900

P

Seeded From UniProt

complete

enables

GO:0034618

arginine binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020899
InterPro:IPR036251

F

Seeded From UniProt

complete

involved_in

GO:0051259

protein complex oligomerization

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020899
InterPro:IPR036251

P

Seeded From UniProt

complete

involved_in

GO:0006525

arginine metabolic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000034392

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000034392

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000034392

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000034392

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0008652

cellular amino acid biosynthetic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0028

P

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

involved_in

GO:0006526

arginine biosynthetic process

GO_REF:0000037
GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0055
UniPathway:UPA00068

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

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Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ Stirling, CJ et al. (1988) The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus. EMBO J. 7 4389-95 PubMed GONUTS page
  2. ↑ 2.0 2.1 Kiupakis, AK & Reitzer, L (2002) ArgR-independent induction and ArgR-dependent superinduction of the astCADBE operon in Escherichia coli. J. Bacteriol. 184 2940-50 PubMed GONUTS page
  3. ↑ Caldara, M et al. (2007) ArgR-dependent repression of arginine and histidine transport genes in Escherichia coli K-12. J. Mol. Biol. 373 251-67 PubMed GONUTS page
  4. ↑ Krzyzek, R & Rogers, P (1972) Arginine control of transcription of argECBH messenger ribonucleic acid in Escherichia coli. J. Bacteriol. 110 945-54 PubMed GONUTS page
  5. ↑ 5.0 5.1 5.2 Van Duyne, GD et al. (1996) Structure of the oligomerization and L-arginine binding domain of the arginine repressor of Escherichia coli. J. Mol. Biol. 256 377-91 PubMed GONUTS page
  6. ↑ Charlier, D et al. (1992) Arginine regulon of Escherichia coli K-12. A study of repressor-operator interactions and of in vitro binding affinities versus in vivo repression. J. Mol. Biol. 226 367-86 PubMed GONUTS page
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