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ECOLI:ARAC
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | araC | |
| Protein Name(s) | Arabinose operon regulatory protein | |
| External Links | ||
| UniProt | P0A9E0 | |
| EMBL | V00256 V00259 J01641 U00096 AP009048 K01303 | |
| PIR | A91473 | |
| RefSeq | NP_414606.1 YP_488370.1 | |
| PDB | 1XJA 2AAC 2ARA 2ARC 2K9S | |
| PDBsum | 1XJA 2AAC 2ARA 2ARC 2K9S | |
| ProteinModelPortal | P0A9E0 | |
| SMR | P0A9E0 | |
| DIP | DIP-9125N | |
| IntAct | P0A9E0 | |
| STRING | 511145.b0064 | |
| EnsemblBacteria | AAC73175 BAB96633 | |
| GeneID | 12931834 944780 | |
| KEGG | ecj:Y75_p0064 eco:b0064 | |
| PATRIC | 32115229 | |
| EchoBASE | EB0052 | |
| EcoGene | EG10054 | |
| eggNOG | COG2207 | |
| HOGENOM | HOG000276603 | |
| InParanoid | P0A9E0 | |
| KO | K02099 | |
| OMA | FYCNPGD | |
| OrthoDB | EOG6K3ZZH | |
| PhylomeDB | P0A9E0 | |
| BioCyc | EcoCyc:PD00242 ECOL316407:JW0063-MONOMER | |
| EvolutionaryTrace | P0A9E0 | |
| PRO | PR:P0A9E0 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0A9E0 | |
| GO | GO:0005737 GO:0043565 GO:0003700 GO:0019568 GO:0006351 | |
| Gene3D | 1.10.10.60 2.60.120.280 | |
| InterPro | IPR003313 IPR009057 IPR018060 IPR018062 IPR020449 | |
| Pfam | PF02311 PF12833 | |
| PRINTS | PR00032 | |
| SMART | SM00342 | |
| SUPFAM | SSF46689 SSF51215 | |
| PROSITE | PS00041 PS01124 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001217 |
DNA-binding transcription repressor activity |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0005667 |
site-directed mutagenesis phenotypic evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019568 |
arabinose catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0001217 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR003313 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019568 |
arabinose catabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Stringer, AM et al. (2014) Genome-scale analyses of Escherichia coli and Salmonella enterica AraC reveal noncanonical targets and an expanded core regulon. J. Bacteriol. 196 660-71 PubMed GONUTS page
- ↑ Soisson, SM et al. (1997) Structural basis for ligand-regulated oligomerization of AraC. Science 276 421-5 PubMed GONUTS page
- ↑ Rajagopala, SV et al. (2014) The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. 32 285-90 PubMed GONUTS page
- ↑ GROSS, J & ENGLESBERG, E (1959) Determination of the order of mutational sites governing L-arabinose utilization in Escherichia coli B/r bv transduction with phage Plbt. Virology 9 314-31 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
