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ECOLI:APPY
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | appY | |
| Protein Name(s) | HTH-type transcriptional regulator AppY
M5 polypeptide | |
| External Links | ||
| UniProt | P05052 | |
| EMBL | Y00138 M24530 U82598 U00096 AP009048 | |
| PIR | A94498 | |
| RefSeq | NP_415096.1 YP_488851.1 | |
| ProteinModelPortal | P05052 | |
| SMR | P05052 | |
| IntAct | P05052 | |
| STRING | 511145.b0564 | |
| PRIDE | P05052 | |
| EnsemblBacteria | AAC73665 BAE76339 | |
| GeneID | 12934528 948797 | |
| KEGG | ecj:Y75_p0551 eco:b0564 | |
| PATRIC | 32116294 | |
| EchoBASE | EB0048 | |
| EcoGene | EG10050 | |
| eggNOG | COG2207 | |
| HOGENOM | HOG000120708 | |
| InParanoid | P05052 | |
| KO | K07780 | |
| OMA | PRKRERY | |
| OrthoDB | EOG63C0R5 | |
| PhylomeDB | P05052 | |
| BioCyc | EcoCyc:PD00967 ECOL316407:JW0553-MONOMER | |
| PRO | PR:P05052 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P05052 | |
| GO | GO:0043565 GO:0003700 GO:0016036 GO:0045893 GO:0006351 | |
| Gene3D | 1.10.10.60 | |
| InterPro | IPR009057 IPR018060 IPR018062 IPR020449 | |
| Pfam | PF12833 | |
| PRINTS | PR00032 | |
| SMART | SM00342 | |
| SUPFAM | SSF46689 | |
| PROSITE | PS00041 PS01124 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016036 |
cellular response to phosphate starvation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016036 |
cellular response to phosphate starvation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010165 |
response to X-ray |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Yang, H et al. (2004) Identification of mutator genes and mutational pathways in Escherichia coli using a multicopy cloning approach. Mol. Microbiol. 53 283-95 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Atlung, T et al. (1997) Effects of sigmaS and the transcriptional activator AppY on induction of the Escherichia coli hya and cbdAB-appA operons in response to carbon and phosphate starvation. J. Bacteriol. 179 2141-6 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Brøndsted, L & Atlung, T (1996) Effect of growth conditions on expression of the acid phosphatase (cyx-appA) operon and the appY gene, which encodes a transcriptional activator of Escherichia coli. J. Bacteriol. 178 1556-64 PubMed GONUTS page
- ↑ Sargentini, NJ et al. () Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Mutat. Res. 793-794 1-14 PubMed GONUTS page
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