GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLI:AMY1
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | malS | |
| Protein Name(s) | Alpha-amylase
1,4-alpha-D-glucan glucanohydrolase | |
| External Links | ||
| UniProt | P25718 | |
| EMBL | X58994 U00039 U00096 AP009048 | |
| PIR | S23807 | |
| RefSeq | NP_418028.1 YP_491863.1 | |
| ProteinModelPortal | P25718 | |
| SMR | P25718 | |
| DIP | DIP-10148N | |
| IntAct | P25718 | |
| MINT | MINT-1293484 | |
| STRING | 511145.b3571 | |
| CAZy | GH13 | |
| PRIDE | P25718 | |
| EnsemblBacteria | AAC76595 BAE77722 | |
| GeneID | 12932718 948088 | |
| KEGG | ecj:Y75_p3604 eco:b3571 | |
| PATRIC | 32122618 | |
| EchoBASE | EB1292 | |
| EcoGene | EG11316 | |
| eggNOG | COG0366 | |
| HOGENOM | HOG000273912 | |
| InParanoid | P25718 | |
| KO | K01176 | |
| OMA | FNWHNAT | |
| OrthoDB | EOG65QWH3 | |
| PhylomeDB | P25718 | |
| BioCyc | EcoCyc:ALPHA-AMYL-PERI-MONOMER ECOL316407:JW3543-MONOMER MetaCyc:ALPHA-AMYL-PERI-MONOMER | |
| PRO | PR:P25718 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P25718 | |
| GO | GO:0030288 GO:0042597 GO:0004556 GO:0005509 GO:0030980 GO:0051692 | |
| Gene3D | 3.20.20.80 | |
| InterPro | IPR014635 IPR015902 IPR006047 IPR006589 IPR013781 IPR017853 | |
| PANTHER | PTHR10357 | |
| Pfam | PF00128 | |
| PIRSF | PIRSF036917 | |
| SMART | SM00642 | |
| SUPFAM | SSF51445 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0051692 |
cellular oligosaccharide catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042597 |
periplasmic space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004556 |
alpha-amylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030980 |
alpha-glucan catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030288 |
outer membrane-bounded periplasmic space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030288 |
outer membrane-bounded periplasmic space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005509 |
calcium ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004556 |
alpha-amylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004556 |
alpha-amylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005509 |
calcium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030980 |
alpha-glucan catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042597 |
periplasmic space |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051692 |
cellular oligosaccharide catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004556 |
alpha-amylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0103025 |
alpha-amylase activity (releasing maltohexaose) |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042597 |
periplasmic space |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Freundlieb, S & Boos, W (1986) Alpha-amylase of Escherichia coli, mapping and cloning of the structural gene, malS, and identification of its product as a periplasmic protein. J. Biol. Chem. 261 2946-53 PubMed GONUTS page
- ↑ Han, MJ et al. (2014) Comparison of the large-scale periplasmic proteomes of the Escherichia coli K-12 and B strains. J. Biosci. Bioeng. 117 437-42 PubMed GONUTS page
- ↑ 3.0 3.1 Spiess, C et al. (1997) Biochemical characterization and mass spectrometric disulfide bond mapping of periplasmic alpha-amylase MalS of Escherichia coli. J. Biol. Chem. 272 22125-33 PubMed GONUTS page
a
b
c
o