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ECOLI:AGAR
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | agaR (synonyms: yhaW) | |
| Protein Name(s) | Putative aga operon transcriptional repressor | |
| External Links | ||
| UniProt | P0ACK2 | |
| EMBL | AF228498 U18997 U00096 AP009048 | |
| PIR | G65102 | |
| RefSeq | NP_417600.1 YP_491319.1 | |
| ProteinModelPortal | P0ACK2 | |
| SMR | P0ACK2 | |
| DIP | DIP-48095N | |
| IntAct | P0ACK2 | |
| MINT | MINT-1304785 | |
| STRING | 511145.b3131 | |
| EnsemblBacteria | AAC76165 BAE77178 | |
| GeneID | 12933420 947636 | |
| KEGG | ecj:Y75_p3053 eco:b3131 | |
| PATRIC | 32121678 | |
| EchoBASE | EB2615 | |
| EcoGene | EG12762 | |
| eggNOG | COG1349 | |
| HOGENOM | HOG000224684 | |
| InParanoid | P0ACK2 | |
| KO | K02081 | |
| OMA | YHFDLLF | |
| OrthoDB | EOG6XSZXW | |
| PhylomeDB | P0ACK2 | |
| BioCyc | EcoCyc:G7630-MONOMER ECOL316407:JW3100-MONOMER | |
| PRO | PR:P0ACK2 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0ACK2 | |
| GO | GO:0005622 GO:0003677 GO:0003700 GO:0006355 GO:0006351 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR014036 IPR001034 IPR018356 IPR011991 | |
| Pfam | PF00455 PF08220 | |
| SMART | SM00420 | |
| PROSITE | PS00894 PS51000 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
| GO:0045892 |
negative regulation of transcription, DNA-dependent |
ECO:0000315 |
P |
Table 4: Mutants without the repressor encoded by agaR constitutively express aga gene products and don't respond to the presence or absence of substrate. |
complete | |||||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Ray, WK & Larson, TJ (2004) Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12. Mol. Microbiol. 51 813-26 PubMed GONUTS page
- ↑ Brinkkötter, A et al. (2000) Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli. Mol. Microbiol. 37 125-35 PubMed GONUTS page
b
