GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECO27:ECPR

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli O127:H6 (strain E2348/69 / EPEC). (574521)
Gene Name(s) ecpR
Protein Name(s) HTH-type transcriptional regulator EcpR
External Links
UniProt B7UJE2
EMBL FM180568
ProteinModelPortal B7UJE2
SMR B7UJE2
EnsemblBacteria CAS07798
KEGG ecg:E2348C_0250
PATRIC 18339434
HOGENOM HOG000059412
OMA CIWPAHD
OrthoDB EOG69GZGV
BioCyc ECOL574521:GJAO-262-MONOMER
Proteomes UP000008205
GO GO:0005737
GO:0003677
GO:0006355
GO:0006351
Gene3D 1.10.10.10
InterPro IPR016032
IPR000792
IPR011991
Pfam PF00196
PRINTS PR00038
SMART SM00421
SUPFAM SSF46894
PROSITE PS50043

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016032

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000792
InterPro:IPR016032

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:2000144

positive regulation of DNA-dependent transcription, initiation

PMID:22797761[1]

ECO:0000315

P

Figure 4 shows that EcpR, a positive regulator of ecp acts on the transcriptional level and shows positive effects on the expression of the ecp promoter.

complete
CACAO 7293

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Martínez-Santos, VI et al. (2012) Transcriptional regulation of the ecp operon by EcpR, IHF, and H-NS in attaching and effacing Escherichia coli. J. Bacteriol. 194 5020-33 PubMed GONUTS page