GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
DROME:SCN60
Contents
| Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
| Gene Name(s) | NaCP60E | |
| Protein Name(s) | Sodium channel protein 60E
Drosophila ion channel 60 Drosophila sodium channel 1 Protein smell-impaired 60E Sodium channel 2 DmNav2 | |
| External Links | ||
| UniProt | Q9W0Y8 | |
| EMBL | AE013599 DQ466888 X14394 X14395 X14396 X14397 X14398 AY060357 X84409 | |
| PIR | S04029 | |
| RefSeq | NP_001189007.2 NP_726495.3 | |
| UniGene | Dm.20002 | |
| ProteinModelPortal | Q9W0Y8 | |
| SMR | Q9W0Y8 | |
| BioGrid | 63549 | |
| IntAct | Q9W0Y8 | |
| MINT | MINT-282473 | |
| PaxDb | Q9W0Y8 | |
| GeneID | 37981 | |
| KEGG | dme:Dmel_CG34405 | |
| CTD | 37981 | |
| FlyBase | FBgn0085434 | |
| eggNOG | COG1226 | |
| InParanoid | Q9W0Y8 | |
| OrthoDB | EOG7ZSHS1 | |
| ChiTaRS | NaCP60E | |
| GenomeRNAi | 37981 | |
| NextBio | 806360 | |
| Proteomes | UP000000803 | |
| GO | GO:0005886 GO:0001518 GO:0022843 GO:0005248 GO:0086010 GO:0019228 GO:0042048 GO:0007608 GO:0035725 GO:0006814 | |
| Gene3D | 1.20.120.350 | |
| InterPro | IPR027359 IPR005821 IPR000048 IPR028820 IPR001696 IPR010526 | |
| PANTHER | PTHR10037:SF182 | |
| Pfam | PF00520 PF06512 | |
| PRINTS | PR00170 | |
| PROSITE | PS50096 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0086010 |
membrane depolarization during action potential |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000004140 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0035725 |
sodium ion transmembrane transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0264255 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019228 |
neuronal action potential |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:98246 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:102965 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005248 |
voltage-gated sodium channel activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0264255 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0001518 |
voltage-gated sodium channel complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000004137 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0022843 |
voltage-gated cation channel activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042048 |
olfactory behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006814 |
sodium ion transport |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005248 |
voltage-gated sodium channel activity |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042048 |
olfactory behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005248 |
voltage-gated sodium channel activity |
DOI:10.2183/pjab.63.284 |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0035725 |
sodium ion transmembrane transport |
DOI:10.2183/pjab.63.284 |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
DOI:10.2183/pjab.63.284 |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0001518 |
voltage-gated sodium channel complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005216 |
ion channel activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005248 |
voltage-gated sodium channel activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006811 |
ion transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006814 |
sodium ion transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006814 |
sodium ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007608 |
sensory perception of smell |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0034765 |
regulation of ion transmembrane transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005244 |
voltage-gated ion channel activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006811 |
ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005272 |
sodium channel activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050896 |
response to stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Zhang, T et al. (2011) Molecular characterization and functional expression of the DSC1 channel. Insect Biochem. Mol. Biol. 41 451-8 PubMed GONUTS page
- ↑ Kulkarni, NH et al. (2002) The DSC1 channel, encoded by the smi60E locus, contributes to odor-guided behavior in Drosophila melanogaster. Genetics 161 1507-16 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Littleton, JT & Ganetzky, B (2000) Ion channels and synaptic organization: analysis of the Drosophila genome. Neuron 26 35-43 PubMed GONUTS page
- ↑ Anholt, RR et al. (1996) Effects of single P-element insertions on olfactory behavior in Drosophila melanogaster. Genetics 143 293-301 PubMed GONUTS page
h
m
r
s
