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DROME:GMDS
Contents
| Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
| Gene Name(s) | Gmd | |
| Protein Name(s) | GDP-mannose 4,6 dehydratase
GDP-D-mannose dehydratase Dm-gmd | |
| External Links | ||
| UniProt | Q9VMW9 | |
| EMBL | AM231687 AE014134 AY089519 | |
| RefSeq | NP_608888.2 | |
| UniGene | Dm.4967 | |
| ProteinModelPortal | Q9VMW9 | |
| SMR | Q9VMW9 | |
| BioGrid | 59900 | |
| PaxDb | Q9VMW9 | |
| EnsemblMetazoa | FBtr0079049 | |
| GeneID | 33716 | |
| KEGG | dme:Dmel_CG8890 | |
| CTD | 33716 | |
| FlyBase | FBgn0031661 | |
| eggNOG | COG1089 | |
| GeneTree | ENSGT00440000033640 | |
| InParanoid | Q9VMW9 | |
| KO | K01711 | |
| OMA | TDCLYLG | |
| OrthoDB | EOG7K6PV5 | |
| PhylomeDB | Q9VMW9 | |
| UniPathway | UPA00128 | |
| GenomeRNAi | 33716 | |
| NextBio | 784930 | |
| PRO | PR:Q9VMW9 | |
| Proteomes | UP000000803 | |
| Bgee | Q9VMW9 | |
| ExpressionAtlas | Q9VMW9 | |
| GO | GO:0050662 GO:0008446 GO:0042351 GO:0042350 GO:0019673 GO:0007219 GO:0048477 GO:2000035 | |
| Gene3D | 3.40.50.720 | |
| HAMAP | MF_00955 | |
| InterPro | IPR001509 IPR006368 IPR016040 | |
| Pfam | PF01370 | |
| TIGRFAMs | TIGR01472 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0042351 |
'de novo' GDP-L-fucose biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000041603 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019673 |
GDP-mannose metabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000041603 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008446 |
GDP-mannose 4,6-dehydratase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11787 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000041603 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048477 |
oogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000035 |
regulation of stem cell division |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045747 |
positive regulation of Notch signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042350 |
GDP-L-fucose biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008446 |
GDP-mannose 4,6-dehydratase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042351 |
'de novo' GDP-L-fucose biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008446 |
GDP-mannose 4,6-dehydratase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008446 |
GDP-mannose 4,6-dehydratase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019673 |
GDP-mannose metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008446 |
GDP-mannose 4,6-dehydratase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042351 |
'de novo' GDP-L-fucose biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00128 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Jagut, M et al. (2013) A mosaic genetic screen for genes involved in the early steps of Drosophila oogenesis. G3 (Bethesda) 3 409-25 PubMed GONUTS page
- ↑ 3.0 3.1 Perdigoto, CN et al. (2011) Distinct levels of Notch activity for commitment and terminal differentiation of stem cells in the adult fly intestine. Development 138 4585-95 PubMed GONUTS page
- ↑ 4.0 4.1 Rhomberg, S et al. (2006) Reconstitution in vitro of the GDP-fucose biosynthetic pathways of Caenorhabditis elegans and Drosophila melanogaster. FEBS J. 273 2244-56 PubMed GONUTS page
- ↑ 5.0 5.1 Sasamura, T et al. (2007) The O-fucosyltransferase O-fut1 is an extracellular component that is essential for the constitutive endocytic trafficking of Notch in Drosophila. Development 134 1347-56 PubMed GONUTS page
