DEIRA:RECA

Species (Taxon ID)	Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422). (243230)
Gene Name(s)	recA (ECO:0000255 with HAMAP-Rule:MF_00268)
Protein Name(s)	Protein RecA (ECO:0000255 with HAMAP-Rule:MF_00268) Recombinase A (ECO:0000255 with HAMAP-Rule:MF_00268)
External Links
UniProt	P42443
EMBL	U01876 AB005471 AE000513
PIR	C75285
RefSeq	NP_296061.1 WP_010888966.1
PDB	1XP8
PDBsum	1XP8
ProteinModelPortal	P42443
SMR	P42443
STRING	243230.DR_2340
PRIDE	P42443
EnsemblBacteria	AAF11887
GeneID	1798669
KEGG	dra:DR_2340
PATRIC	21632388
eggNOG	COG0468
HOGENOM	HOG000264120
InParanoid	P42443
KO	K03553
OMA	YGEGINT
OrthoDB	EOG6ZKXNZ
BioCyc	DRAD243230:GH46-2389-MONOMER
EvolutionaryTrace	P42443
Proteomes	UP000002524
GO	GO:0005737 GO:0005524 GO:0003684 GO:0008094 GO:0003697 GO:0006310 GO:0006302 GO:0009432
Gene3D	3.30.250.10 3.40.50.300
HAMAP	MF_00268
InterPro	IPR003593 IPR013765 IPR020584 IPR027417 IPR020588 IPR023400 IPR020587
PANTHER	PTHR22942:SF1
Pfam	PF00154
PRINTS	PR00142
SMART	SM00382
SUPFAM	SSF52540 SSF54752
TIGRFAMs	TIGR02012
PROSITE	PS00321 PS50162 PS50163

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
	GO:0006302	double-strand break repair	PMID:20090937^[1]	ECO:0000315			P	Figure 4 shows that gamma radiation sensitivity increases in recA mutants. Figure 6 illustrates that DNA repair in recA mutants started becoming visible at 24 hours.	complete CACAO 8019
involved_in	GO:0006302	double-strand break repair	PMID:20090937^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005829	cytosol	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000534715 UniProtKB:P9WHJ3	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588	F	Seeded From UniProt	complete
enables	GO:0003697	single-stranded DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013765	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588	F	Seeded From UniProt	complete
involved_in	GO:0006259	DNA metabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR020584 InterPro:IPR020587	P	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013765 InterPro:IPR020588	P	Seeded From UniProt	complete
enables	GO:0008094	DNA-dependent ATPase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588	F	Seeded From UniProt	complete
involved_in	GO:0006974	cellular response to DNA damage stimulus	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	P	Seeded From UniProt	complete
involved_in	GO:0006310	DNA recombination	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	P	Seeded From UniProt	complete
enables	GO:0003684	damaged DNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	F	Seeded From UniProt	complete
enables	GO:0003697	single-stranded DNA binding	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	F	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	C	Seeded From UniProt	complete
enables	GO:0008094	DNA-dependent ATPase activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	F	Seeded From UniProt	complete
involved_in	GO:0009432	SOS response	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	P	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000083075	P	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C	Seeded From UniProt	complete
involved_in	GO:0006974	cellular response to DNA damage stimulus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0227	P	Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0234	P	Seeded From UniProt	complete
involved_in	GO:0006310	DNA recombination	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0233	P	Seeded From UniProt	complete
involved_in	GO:0009432	SOS response	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0742	P	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0067	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Bentchikou, E et al. (2010) A major role of the RecFOR pathway in DNA double-strand-break repair through ESDSA in Deinococcus radiodurans. PLoS Genet. 6 e1000774 PubMed GONUTS page
↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:20090937-1] 1.0 ^1.1 Bentchikou, E et al. (2010) A major role of the RecFOR pathway in DNA double-strand-break repair through ESDSA in Deinococcus radiodurans. PLoS Genet. 6 e1000774 PubMed GONUTS page

[PMID:21873635-2] Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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DEIRA:RECA

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