GONUTS has been updated to MW1.29.2. Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

DANRE:Q9W767

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) No Information Provided.
Protein Name(s) Midkine-related growth factor (ECO:0000313 with EMBL:AAH71342.1)

Midkine-related growth factor Mdk1 (ECO:0000313 with EMBL:AAM27446.1) Pleiotrophin 1 (ECO:0000313 with EMBL:AAD38157.1) Uncharacterized protein (ECO:0000313 with Ensembl:ENSDARP00000052317)

External Links
UniProt Q9W767
EMBL CR356225
AF149802
BC071342
AF503614
RefSeq NP_571145.1
UniGene Dr.31448
PDB 2LUT
PDBsum 2LUT
STRING 7955.ENSDARP00000052317
Ensembl ENSDART00000052318
ENSDART00000124343
GeneID 30277
KEGG dre:30277
CTD 30277
ZFIN ZDB-GENE-990621-1
eggNOG NOG39111
GeneTree ENSGT00390000007640
HOGENOM HOG000231473
HOVERGEN HBG008317
KO K06828
OMA NAQCQET
TreeFam TF332376
Reactome REACT_233416
NextBio 20806723
Proteomes UP000000437
GO GO:0001841
GO:0051726
Gene3D 2.20.60.10
2.30.90.10
InterPro IPR000762
IPR020090
IPR020091
IPR020089
PANTHER PTHR13850
Pfam PF01091
PF05196
PRINTS PR00269
ProDom PD005592
SMART SM00193
SUPFAM SSF57288

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005829

cytosol

PMID:25803551[1]

IDA: Inferred from Direct Assay

C

" These experiments show co-localization of the GFP and Mdka immunofluorescence, demonstrating that in horizontal cells the Mdka immunolabel is cytosolic (Fig. 2A). "

complete
CACAO 10845

GO:0005737

cytoplasm

PMID:25803551[1]

IDA: Inferred from Direct Assay

C

"As seen in Figure 2, immunolabels for both Mdka and EGFP colocalize to the cytoplasm of horizontal cells (arrowhead, panel A). "

complete
CACAO 10847

GO:0005794

Golgi apparatus

PMID:25803551[1]

IDA: Inferred from Direct Assay

C

As seen in Figure 2, "In the adult retina, Mdka immunostaining colocalizes with the antibody marker of the Golgi complex (column B; and insets)"

complete
CACAO 10848

GO:0005794

Golgi apparatus

PMID:25803551[1]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

GO:0008083

growth factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000762
InterPro:IPR020089
InterPro:IPR020090
InterPro:IPR020091

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gramage, E et al. (2015) Midkine-a protein localization in the developing and adult retina of the zebrafish and its function during photoreceptor regeneration. PLoS ONE 10 e0121789 PubMed GONUTS page