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DANRE:Q8AVB1

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) No Information Provided.
Protein Name(s) Slow troponin T (ECO:0000313 with EMBL:AAN32755.1)

Troponin T1, skeletal, slow (ECO:0000313 with EMBL:AAH71491.1) Uncharacterized protein (ECO:0000313 with Ensembl:ENSDARP00000044153)

External Links
UniProt Q8AVB1
EMBL BX005210
BC071491
AF425255
AF512524
RefSeq NP_852476.1
UniGene Dr.13906
SMR Q8AVB1
STRING 7955.ENSDARP00000044153
Ensembl ENSDART00000044154
GeneID 353248
KEGG dre:353248
CTD 7138
ZFIN ZDB-GENE-030520-1
eggNOG NOG299534
GeneTree ENSGT00390000013611
HOGENOM HOG000231049
HOVERGEN HBG052790
OMA HAEKFEL
OrthoDB EOG7W155J
PhylomeDB Q8AVB1
TreeFam TF313321
Reactome REACT_233488
NextBio 20812722
Proteomes UP000000437
GO GO:0005861
GO:0006937
GO:0045214
InterPro IPR027707
IPR001978
PANTHER PTHR11521
Pfam PF00992

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045214

sarcomere organization

PMID:21245197[1]

ECO:0000316

genetic interaction evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-110228-1
ZFIN:ZDB-MRPHLNO-110228-3
ZFIN:ZDB-MRPHLNO-110228-4

P

Seeded From UniProt

complete

involved_in

GO:0045214

sarcomere organization

PMID:21245197[1]

ECO:0000316

genetic interaction evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-110228-1
ZFIN:ZDB-MRPHLNO-110228-2

P

Seeded From UniProt

complete

involved_in

GO:0060048

cardiac muscle contraction

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000162487
RGD:3882
UniProtKB:P45379

P

Seeded From UniProt

complete

involved_in

GO:0045214

sarcomere organization

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004169
MGI:MGI:104597
PANTHER:PTN000162487
WB:WBGene00003495
ZFIN:ZDB-GENE-030520-1

P

Seeded From UniProt

complete

contributes_to

GO:0030899

calcium-dependent ATPase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000162487
UniProtKB:P45378

F

Seeded From UniProt

complete

involved_in

GO:0006936

muscle contraction

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104597
PANTHER:PTN000162487
RGD:3882
WB:WBGene00006589

P

Seeded From UniProt

complete

part_of

GO:0005861

troponin complex

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104597
PANTHER:PTN000162487
RGD:3882
RGD:3883
RGD:621852
UniProtKB:P13805
UniProtKB:P45378
UniProtKB:P45379

C

Seeded From UniProt

complete

contributes_to

GO:0005523

tropomyosin binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000162487
UniProtKB:P13805
UniProtKB:P45378
UniProtKB:P45379

F

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004169
PANTHER:PTN000162487

F

Seeded From UniProt

complete

involved_in

GO:0003009

skeletal muscle contraction

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000162487
UniProtKB:P13805
UniProtKB:P45378

P

Seeded From UniProt

complete

part_of

GO:0005861

troponin complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001978
InterPro:IPR027707

C

Seeded From UniProt

complete

involved_in

GO:0006937

regulation of muscle contraction

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR027707

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Ferrante, MI et al. (2011) Troponin T is essential for sarcomere assembly in zebrafish skeletal muscle. J. Cell. Sci. 124 565-77 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page