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DANRE:Q5RHJ3
Contents
Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Uncharacterized protein (ECO:0000313 with Ensembl:ENSDARP00000025716) | |
External Links | ||
UniProt | Q5RHJ3 | |
EMBL | BX296520 BX324141 BX511069 | |
RefSeq | NP_001025307.1 XP_005160559.1 XP_005160560.1 | |
UniGene | Dr.74015 | |
SMR | Q5RHJ3 | |
Ensembl | ENSDART00000004984 ENSDART00000152290 | |
GeneID | 560060 | |
KEGG | dre:560060 | |
CTD | 560060 | |
ZFIN | ZDB-GENE-030131-4212 | |
GeneTree | ENSGT00760000118986 | |
HOGENOM | HOG000237318 | |
HOVERGEN | HBG101333 | |
KO | K04512 | |
OMA | QNSAMAP | |
OrthoDB | EOG7B8S37 | |
PhylomeDB | Q5RHJ3 | |
TreeFam | TF314602 | |
Reactome | REACT_202432 | |
NextBio | 20883270 | |
Proteomes | UP000000437 | |
GO | GO:0030036 GO:0060026 | |
InterPro | IPR016024 IPR027650 IPR014767 IPR015425 IPR010472 IPR010473 IPR014768 | |
PANTHER | PTHR23213:SF181 | |
Pfam | PF06367 PF06371 PF02181 | |
SMART | SM00498 | |
SUPFAM | SSF48371 | |
PROSITE | PS51231 PS51444 PS51232 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0060026 |
convergent extension |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003779 |
actin binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0030139 |
endocytic vesicle |
ECO:0000314 |
C |
Fig. 1A shows the localization of Daam1 to the endocytic vesicles. |
complete | |||||
involved_in |
GO:0016043 |
cellular component organization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0017048 |
Rho GTPase binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0048570 |
notochord morphogenesis |
ECO:0000315 |
P |
Figure 9A shows that when Daam1 is blocked, the tail is short and bent tail and cyclopia, related to the morphogenesis of the notochord. Morpholino oligonucleotide was used to inactivate the Daam1 resulting in the mutant phenotype. |
complete | |||||
involved_in |
GO:0030036 |
actin cytoskeleton organization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
GO:0030863 |
cortical cytoskeleton |
ECO:0000314 |
C |
Figure 4D shows that Daam1 colocalizes with the cytoskeleton at the cell cortex identified through fluorescence. This is further stated in the paragraph on page 6711 with the heading of cytoskeleton and Daam1. |
complete | |||||
Notes
References
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