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DANRE:NPHP3
Contents
| Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
| Gene Name(s) | nphp3 | |
| Protein Name(s) | Nephrocystin-3 | |
| External Links | ||
| UniProt | P0CI65 | |
| EMBL | BX470247 CR381660 | |
| RefSeq | NP_001189370.1 XP_009295568.1 | |
| UniGene | Dr.92966 | |
| ProteinModelPortal | P0CI65 | |
| GeneID | 562601 | |
| KEGG | dre:562601 | |
| CTD | 27031 | |
| InParanoid | P0CI65 | |
| PhylomeDB | P0CI65 | |
| NextBio | 20884486 | |
| Proteomes | UP000000437 | |
| Bgee | P0CI65 | |
| GO | GO:0072372 GO:0060271 GO:0016055 | |
| Gene3D | 1.25.40.10 3.40.50.300 | |
| InterPro | IPR027417 IPR013026 IPR011990 IPR019734 | |
| Pfam | PF13176 | |
| SMART | SM00028 | |
| SUPFAM | SSF52540 | |
| PROSITE | PS50005 PS50293 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0042384 |
cilium assembly |
ECO:0000315 |
P |
Fig. 5 |
complete | |||||
|
involved_in |
GO:0060271 |
cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005929 |
cilium |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060271 |
cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0070121 |
Kupffer's vesicle development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-120424-7 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0060972 |
left/right pattern formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-100629-2 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0060026 |
convergent extension |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-100629-2 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048793 |
pronephros development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-100629-4 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-120424-7 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0003146 |
heart jogging |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-100629-2 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005929 |
cilium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016055 |
Wnt signaling pathway |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Zhou, W et al. (2010) Nephrocystin-3 is required for ciliary function in zebrafish embryos. Am. J. Physiol. Renal Physiol. 299 F55-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Wright, KJ et al. (2011) An ARL3-UNC119-RP2 GTPase cycle targets myristoylated NPHP3 to the primary cilium. Genes Dev. 25 2347-60 PubMed GONUTS page
- ↑ Hoff, S et al. (2013) ANKS6 is a central component of a nephronophthisis module linking NEK8 to INVS and NPHP3. Nat. Genet. 45 951-6 PubMed GONUTS page
