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DANRE:E4VNZ2

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) dnm1 (ECO:0000313 with EMBL:ABQ82135.1)
Protein Name(s) Dynamin 1 (ECO:0000313 with EMBL:ABQ82135.1)
External Links
UniProt E4VNZ2
EMBL EF395230
RefSeq NP_001232894.1
UniGene Dr.83356
GeneID 100307098
KEGG dre:100307098
CTD 100307098
KO K01528
PhylomeDB E4VNZ2
GO GO:0005874
GO:0005525
GO:0003924
Gene3D 2.30.29.30
3.40.50.300
InterPro IPR027741
IPR000375
IPR001401
IPR019762
IPR022812
IPR030381
IPR003130
IPR020850
IPR027417
IPR001849
IPR011993
PANTHER PTHR11566
PTHR11566:SF32
Pfam PF01031
PF02212
PF00169
PRINTS PR00195
SMART SM00053
SM00302
SM00233
SUPFAM SSF52540
PROSITE PS00410
PS51718
PS51388
PS50003

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0014028

notochord formation

PMID:17412835[1]

ECO:0000315

P

Figure 3J shows that when the dnm1 protein was inhibited by morpholino oligonucleotides the notochord developed to be short and bent compared to the wild type.

complete

involved_in

GO:0098884

postsynaptic neurotransmitter receptor internalization

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

P

Seeded From UniProt

complete

part_of

GO:0098844

postsynaptic endocytic zone membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

involved_in

GO:0050803

regulation of synapse structure or activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000170172

P

Seeded From UniProt

complete

part_of

GO:0045211

postsynaptic membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
UniProtKB:P50570

C

Seeded From UniProt

complete

part_of

GO:0045202

synapse

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000170172
RGD:71096
RGD:727949
WB:WBGene00001130

C

Seeded From UniProt

complete

part_of

GO:0044327

dendritic spine head

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

involved_in

GO:0031623

receptor internalization

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000902093
RGD:71096
UniProtKB:P50570

P

Seeded From UniProt

complete

part_of

GO:0031410

cytoplasmic vesicle

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000902092
WB:WBGene00001130

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949
WB:WBGene00001130

C

Seeded From UniProt

complete

involved_in

GO:0016185

synaptic vesicle budding from presynaptic endocytic zone membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
MGI:MGI:107384
MGI:MGI:1341299
PANTHER:PTN000902093

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170013
TAIR:locus:2006777
TAIR:locus:2012763
UniProtKB:Q8S944

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

enables

GO:0008017

microtubule binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000170013

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000902092
RGD:2513
RGD:71096

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
MGI:MGI:1921256
PANTHER:PTN000170013
PomBase:SPBC12C2.08
RGD:2513
RGD:628821
RGD:71096
RGD:727949
TAIR:locus:2006777
UniProtKB:K7GKN2
UniProtKB:O00429
UniProtKB:P20591
UniProtKB:P27594
UniProtKB:P79135
UniProtKB:Q8IHR4
dictyBase:DDB_G0277849
dictyBase:DDB_G0277851

C

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170013
RGD:2513
RGD:727949
SGD:S000001709
SGD:S000003924
UniProtKB:K7GKN2
UniProtKB:O00429
UniProtKB:O60313
UniProtKB:P27594
UniProtKB:P42697
UniProtKB:Q8S944
WB:WBGene00001130
dictyBase:DDB_G0277849

F

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0016185

C

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001401
InterPro:IPR003130
InterPro:IPR027741

F

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000375
InterPro:IPR001401
InterPro:IPR003130
InterPro:IPR030381

F

Seeded From UniProt

complete

involved_in

GO:0072583

clathrin-dependent endocytosis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR027741

P

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0342

F

Seeded From UniProt

complete

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Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ Kida, YS et al. (2007) Daam1 regulates the endocytosis of EphB during the convergent extension of the zebrafish notochord. Proc. Natl. Acad. Sci. U.S.A. 104 6708-13 PubMed GONUTS page
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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