It is now the 5th OPEN Period for CACAO Fall 2017! It will end on Sunday November 19, 2017 at 11:59 pm CST
This is your chance to make annotations OR challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

Have any questions? Please email us at ecoliwiki@gmail.com

DANRE:D2XMV0

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) ptk7b (ECO:0000313 with ZFIN:ZDB-GENE-101124-3)
Protein Name(s) Protein tyrosine kinase 7 long isoform (ECO:0000313 with EMBL:ADB22375.1)
External Links
UniProt D2XMV0
EMBL GU211905
UniGene Dr.158881
ProteinModelPortal D2XMV0
ZFIN ZDB-GENE-101124-3
PhylomeDB D2XMV0
GO GO:0016301
GO:0060026
Gene3D 2.60.40.10
InterPro IPR007110
IPR013783
IPR013098
IPR003599
IPR003598
Pfam PF07679
SMART SM00409
SM00408
PROSITE PS50835

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0048598

embryonic morphogenesis

PMID:23533179[1]

IDA: Inferred from Direct Assay

P

Figure 2

complete
CACAO 7316

GO:0016301

kinase activity

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0418

F

Seeded From UniProt

complete

GO:0016310

phosphorylation

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0418

P

Seeded From UniProt

complete

GO:0048598

embryonic morphogenesis

PMID:23533179[1]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

complete

GO:0060026

convergent extension

PMID:20837484[2]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-081029-4
ZFIN:ZDB-MRPHLNO-081029-5
ZFIN:ZDB-MRPHLNO-101124-1

P

Seeded From UniProt

complete

GO:0060026

convergent extension

PMID:20837484[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-101124-1

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Hayes, M et al. (2013) Ptk7 promotes non-canonical Wnt/PCP-mediated morphogenesis and inhibits Wnt/β-catenin-dependent cell fate decisions during vertebrate development. Development 140 1807-18 PubMed GONUTS page
  2. 2.0 2.1 Golubkov, VS et al. (2010) The Wnt/planar cell polarity protein-tyrosine kinase-7 (PTK7) is a highly efficient proteolytic target of membrane type-1 matrix metalloproteinase: implications in cancer and embryogenesis. J. Biol. Chem. 285 35740-9 PubMed GONUTS page