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DANRE:B3DKQ3
Contents
| Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | Col2a1a protein (ECO:0000313 with EMBL:AAI63934.1) | |
| External Links | ||
| UniProt | B3DKQ3 | |
| EMBL | BC163934 | |
| UniGene | Dr.75057 | |
| ZFIN | ZDB-GENE-980526-192 | |
| eggNOG | NOG12793 | |
| HOGENOM | HOG000085654 | |
| HOVERGEN | HBG004933 | |
| GO | GO:0005581 GO:0005201 | |
| InterPro | IPR008160 IPR000885 IPR001007 | |
| Pfam | PF01410 PF01391 PF00093 | |
| ProDom | PD002078 | |
| SMART | SM00038 SM00214 | |
| PROSITE | PS51461 PS01208 PS50184 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0048706 |
embryonic skeletal system development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-180503-9 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048706 |
embryonic skeletal system development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-180503-13 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030903 |
notochord development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-070919-4 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030903 |
notochord development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-070818-2 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030903 |
notochord development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-070818-1 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007411 |
axon guidance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-980202-988 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005581 |
collagen trimer |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
protein_id:AAA58428 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88445 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030903 |
notochord development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88452 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030199 |
collagen fibril organization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88452 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030198 |
extracellular matrix organization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1095415 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88452 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005581 |
collagen trimer |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88452 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005201 |
extracellular matrix structural constituent |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104687 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0001501 |
skeletal system development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88458 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005201 |
extracellular matrix structural constituent |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Henke, K et al. (2017) Genetic Screen for Postembryonic Development in the Zebrafish (): Dominant Mutations Affecting Adult Form. Genetics 207 609-623 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gansner, JM et al. (2007) Essential role of lysyl oxidases in notochord development. Dev. Biol. 307 202-13 PubMed GONUTS page
- ↑ Warga, RM et al. (2016) Progressive loss of RacGAP1/ogre activity has sequential effects on cytokinesis and zebrafish development. Dev. Biol. 418 307-22 PubMed GONUTS page
- ↑ Yan, YL et al. (1995) Expression of a type II collagen gene in the zebrafish embryonic axis. Dev. Dyn. 203 363-76 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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