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CLOSD:C1FW08
Contents
| Species (Taxon ID) | Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB10654). (499177) | |
| Gene Name(s) | orr (ECO:0000313 with EMBL:CAQ42981.1) | |
| Protein Name(s) | Ornithine racemase (ECO:0000313 with EMBL:CAQ42981.1) | |
| External Links | ||
| UniProt | C1FW08 | |
| EMBL | CU695250 FP565809 | |
| RefSeq | YP_003936313.1 | |
| ProteinModelPortal | C1FW08 | |
| EnsemblBacteria | CBH21408 | |
| GeneID | 9854830 | |
| KEGG | cst:CLOST_1288 | |
| PATRIC | 42273207 | |
| HOGENOM | HOG000057993 | |
| OMA | RIPMLSE | |
| BioCyc | CSTI499177:GJE9-1336-MONOMER MetaCyc:MONOMER-12478 | |
| Proteomes | UP000007041 | |
| GO | GO:0050157 | |
| Gene3D | 3.20.20.10 | |
| InterPro | IPR001608 IPR029066 | |
| Pfam | PF01168 | |
| SUPFAM | SSF51419 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
Contributes to |
GO:0050157 |
ornithine racemase activity |
ECO:0000314 |
F |
The study used a coupling assay with further down step reactions to measure the conversion of L-amino acid to D-amino acid with this enzyme. When placed into solution with the enzyme, only ornithine was converted from its L state to D state. This analysis was done by comparing flow peaks on a HPLC column using many different L-amino acids. |
complete | ||||
|
involved_in |
GO:0006591 |
ornithine metabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0070280 |
pyridoxal binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050157 |
ornithine racemase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050157 |
ornithine racemase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0070280 |
pyridoxal binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050157 |
ornithine racemase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Chen, HP et al. (2000) Purification and properties of ornithine racemase from Clostridium sticklandii. J. Bacteriol. 182 2052-4 PubMed GONUTS page
- ↑ 2.0 2.1 Fonknechten, N et al. (2009) A conserved gene cluster rules anaerobic oxidative degradation of L-ornithine. J. Bacteriol. 191 3162-7 PubMed GONUTS page
