GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CLOPE:Q8XKA0
Contents
| Species (Taxon ID) | Clostridium perfringens (strain 13 / Type A). (195102) | |
| Gene Name(s) | virR (ECO:0000313 with EMBL:BAB81207.1) | |
| Protein Name(s) | Two-component response regulator (ECO:0000313 with EMBL:BAB81207.1) | |
| External Links | ||
| UniProt | Q8XKA0 | |
| EMBL | BA000016 | |
| RefSeq | NP_562417.1 | |
| ProteinModelPortal | Q8XKA0 | |
| STRING | 195102.CPE1501 | |
| EnsemblBacteria | BAB81207 | |
| GeneID | 989811 | |
| KEGG | cpe:CPE1501 | |
| PATRIC | 19496949 | |
| HOGENOM | HOG000242207 | |
| OMA | IRHTIVI | |
| OrthoDB | EOG65TRSH | |
| BioCyc | CPER195102:GJFM-1547-MONOMER | |
| Proteomes | UP000000818 | |
| GO | GO:0003677 GO:0000160 GO:0010628 GO:0006355 GO:0006351 | |
| InterPro | IPR011006 IPR007492 IPR001789 | |
| Pfam | PF04397 PF00072 | |
| SMART | SM00850 SM00448 | |
| SUPFAM | SSF52172 | |
| PROSITE | PS50930 PS50110 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
| GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
P |
Figure 5. shows the diminished expression of pfoA, pfoR, colA, and plc virulence genes in TS133 virR mutant strain. |
complete | |||||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Ba-Thein, W et al. (1996) The virR/virS locus regulates the transcription of genes encoding extracellular toxin production in Clostridium perfringens. J. Bacteriol. 178 2514-20 PubMed GONUTS page